RNA id: unassigned_transcript_849



Basic Information


Item Value
RNA id unassigned_transcript_849
length 82
RNA type tRNA
GC content 0.59
exon number 1
gene id trnas-uga_103
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26717269 ~ 26717350 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtagttgtggccgagaggttaaggcgatggacttgaaatccattggggtctccccgcgcaggttcgaaccctgccgactacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250546.1 lncRNA downstream 27817 26688613 ~ 26689452 (-) True LOC122342214
TU46371 lncRNA downstream 238336 26478716 ~ 26478933 (-) True G31413
TU46360 lncRNA downstream 283483 26428152 ~ 26433786 (-) True G31402
XR_006250605.1 lncRNA downstream 412597 26303662 ~ 26304672 (-) True LOC122342589
TU46357 lncRNA downstream 479031 26237920 ~ 26238238 (-) True G31399
XR_006250601.1 lncRNA upstream 14310 26731660 ~ 26732626 (-) True LOC122342580
TU46385 lncRNA upstream 184356 26901706 ~ 26901995 (-) True G31425
TU46386 lncRNA upstream 271237 26988587 ~ 26988954 (-) True G31426
TU46454 lncRNA upstream 643554 27360904 ~ 27406081 (-) False G31462
TU46455 lncRNA upstream 643554 27360904 ~ 27406081 (-) True G31462
XM_043236144.1 mRNA downstream 23723 26692621 ~ 26693546 (-) True LOC122342364
XM_043236143.1 mRNA downstream 25592 26689984 ~ 26691677 (-) True LOC122342363
XM_043236140.1 mRNA downstream 691162 26023937 ~ 26026107 (-) True LOC122342359
XM_043236138.1 mRNA downstream 694025 26022144 ~ 26023244 (-) True LOC122342358
XM_043236136.1 mRNA downstream 761648 25952760 ~ 25955621 (-) True LOC122342356
XM_043236146.1 mRNA upstream 148423 26865773 ~ 26869148 (-) True LOC122342367
XM_043236245.1 mRNA upstream 666403 27383753 ~ 27389398 (-) True LOC122342454
XM_043238050.1 mRNA upstream 691738 27409088 ~ 27415650 (-) True flot1a
XM_043237703.1 mRNA upstream 1229646 27946996 ~ 27951997 (-) True pdk2b
XM_043237697.1 mRNA upstream 1248959 27966309 ~ 27969769 (-) False LOC122343310
unassigned_transcript_848 other downstream 1419 26715778 ~ 26715850 (-) True trnak-uuu_96
unassigned_transcript_847 other downstream 5584 26711603 ~ 26711685 (-) True trnas-aga_106
unassigned_transcript_846 other downstream 5926 26711263 ~ 26711343 (-) True trnas-uga_102
unassigned_transcript_845 other downstream 7474 26709723 ~ 26709795 (-) True trnak-uuu_95
unassigned_transcript_844 other downstream 8276 26708913 ~ 26708993 (-) True trnas-aga_105
unassigned_transcript_850 other upstream 263 26717613 ~ 26717695 (-) True trnas-aga_107
unassigned_transcript_851 other upstream 1249 26718599 ~ 26718680 (-) True trnas-uga_104
unassigned_transcript_852 other upstream 1468 26718818 ~ 26718890 (-) True trnak-uuu_97
unassigned_transcript_853 other upstream 2991 26720341 ~ 26720421 (-) True trnas-uga_105
unassigned_transcript_854 other upstream 4147 26721497 ~ 26721569 (-) True trnak-uuu_98