RNA id: unassigned_transcript_903


Basic Information

Item Value
RNA id unassigned_transcript_903
length 75
RNA type tRNA
GC content 0.59
exon number 1
gene id trnar-acg_35
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26983239 ~ 26983313 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gggccagtggcgcaatggataacgcgcgtctgactacggatcagaagattctaggttcgactcctggctggctcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250602.1 lncRNA upstream 48888 26933340 ~ 26934351 (+) True LOC122342584
TU46384 lncRNA upstream 81234 26901712 ~ 26902005 (+) True G31424
TU46382 lncRNA upstream 114768 26868192 ~ 26868471 (+) True G31422
TU46380 lncRNA upstream 203633 26779293 ~ 26779606 (+) True G31420
XR_006250760.1 lncRNA upstream 213419 26768931 ~ 26769820 (+) True LOC122343359
TU46387 lncRNA downstream 9721 26993034 ~ 26993354 (+) True G31427
TU46388 lncRNA downstream 101004 27084317 ~ 27084707 (+) True G31428
TU46389 lncRNA downstream 214574 27197887 ~ 27198266 (+) True G31429
TU46401 lncRNA downstream 249783 27233096 ~ 27233432 (+) True G31438
TU46404 lncRNA downstream 314223 27297536 ~ 27369182 (+) False LOC122342372
XM_043236145.1 mRNA upstream 216066 26764953 ~ 26767173 (+) True LOC122342366
XM_043236142.1 mRNA upstream 556000 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 805621 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 1005616 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 1254588 25711662 ~ 25728651 (+) True col9a3
XM_043236148.1 mRNA downstream 21388 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 224423 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 373499 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 380705 27364018 ~ 27371196 (+) True LOC122342372
XM_043236921.1 mRNA downstream 407026 27390339 ~ 27406088 (+) True LOC122342806
unassigned_transcript_902 other upstream 781 26982372 ~ 26982458 (+) True trnay-gua_37
unassigned_transcript_901 other upstream 993 26982176 ~ 26982246 (+) True trnae-uuc_28
unassigned_transcript_900 other upstream 1345 26981822 ~ 26981894 (+) True trnar-acg_34
unassigned_transcript_898 other upstream 2199 26980954 ~ 26981040 (+) True trnay-gua_36
unassigned_transcript_897 other upstream 2756 26980411 ~ 26980483 (+) True trnar-acg_33
unassigned_transcript_904 other downstream 282 26983595 ~ 26983666 (+) True trnae-uuc_29
unassigned_transcript_906 other downstream 1343 26984656 ~ 26984728 (+) True trnar-acg_36
unassigned_transcript_907 other downstream 1882 26985195 ~ 26985285 (+) True trnay-gua_38
unassigned_transcript_908 other downstream 2752 26986065 ~ 26986137 (+) True trnah-aug
unassigned_transcript_909 other downstream 3106 26986419 ~ 26986490 (+) True trnae-uuc_30