RNA id: unassigned_transcript_910


Basic Information

Item Value
RNA id unassigned_transcript_910
length 73
RNA type tRNA
GC content 0.56
exon number 2
gene id trnay-gua_39
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26986616 ~ 26986702 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCTTcgatagctcagttggtagagcggaggactgtagatccttaggtcgctggttcgactccggctcgaagga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250602.1 lncRNA upstream 52265 26933340 ~ 26934351 (+) True LOC122342584
TU46384 lncRNA upstream 84611 26901712 ~ 26902005 (+) True G31424
TU46382 lncRNA upstream 118145 26868192 ~ 26868471 (+) True G31422
TU46380 lncRNA upstream 207010 26779293 ~ 26779606 (+) True G31420
XR_006250760.1 lncRNA upstream 216796 26768931 ~ 26769820 (+) True LOC122343359
TU46387 lncRNA downstream 6332 26993034 ~ 26993354 (+) True G31427
TU46388 lncRNA downstream 97615 27084317 ~ 27084707 (+) True G31428
TU46389 lncRNA downstream 211185 27197887 ~ 27198266 (+) True G31429
TU46401 lncRNA downstream 246394 27233096 ~ 27233432 (+) True G31438
TU46404 lncRNA downstream 310834 27297536 ~ 27369182 (+) False LOC122342372
XM_043236145.1 mRNA upstream 219443 26764953 ~ 26767173 (+) True LOC122342366
XM_043236142.1 mRNA upstream 559377 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 808998 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 1008993 25974877 ~ 25977623 (+) True LOC122342357
XM_043236264.1 mRNA upstream 1257965 25711662 ~ 25728651 (+) True col9a3
XM_043236148.1 mRNA downstream 17999 27004701 ~ 27006306 (+) True LOC122342369
XM_043236149.1 mRNA downstream 221034 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 370110 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 377316 27364018 ~ 27371196 (+) True LOC122342372
XM_043236921.1 mRNA downstream 403637 27390339 ~ 27406088 (+) True LOC122342806
unassigned_transcript_909 other upstream 126 26986419 ~ 26986490 (+) True trnae-uuc_30
unassigned_transcript_908 other upstream 479 26986065 ~ 26986137 (+) True trnah-aug
unassigned_transcript_907 other upstream 1331 26985195 ~ 26985285 (+) True trnay-gua_38
unassigned_transcript_906 other upstream 1888 26984656 ~ 26984728 (+) True trnar-acg_36
unassigned_transcript_904 other upstream 2950 26983595 ~ 26983666 (+) True trnae-uuc_29
unassigned_transcript_911 other downstream 1336 26988038 ~ 26988124 (+) True trnay-gua_40
unassigned_transcript_913 other downstream 7207 26993909 ~ 26993981 (+) True trnar-acg_37
unassigned_transcript_914 other downstream 7752 26994454 ~ 26994541 (+) True trnay-gua_41
unassigned_transcript_916 other downstream 10530 26997232 ~ 26997304 (+) True trnar-acg_38
unassigned_transcript_917 other downstream 10887 26997589 ~ 26997660 (+) True trnae-uuc_31