RNA id: unassigned_transcript_952


Basic Information

Item Value
RNA id unassigned_transcript_952
length 73
RNA type tRNA
GC content 0.49
exon number 1
gene id trnav-aac_9
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27141552 ~ 27141624 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtttctgtagtgtactGGTCATCACGTTTGCCTAACACGCGAAAGGGcctcggttcaaaaccgagcagaaaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46388 lncRNA upstream 56845 27084317 ~ 27084707 (+) True G31428
TU46387 lncRNA upstream 148198 26993034 ~ 26993354 (+) True G31427
XR_006250602.1 lncRNA upstream 207201 26933340 ~ 26934351 (+) True LOC122342584
TU46384 lncRNA upstream 239547 26901712 ~ 26902005 (+) True G31424
TU46382 lncRNA upstream 273081 26868192 ~ 26868471 (+) True G31422
TU46389 lncRNA downstream 56263 27197887 ~ 27198266 (+) True G31429
TU46401 lncRNA downstream 91472 27233096 ~ 27233432 (+) True G31438
TU46404 lncRNA downstream 155912 27297536 ~ 27369182 (+) False LOC122342372
TU46414 lncRNA downstream 219219 27360843 ~ 27406082 (+) False LOC122342806
TU46415 lncRNA downstream 219219 27360843 ~ 27406082 (+) False LOC122342806
XM_043236148.1 mRNA upstream 135246 27004701 ~ 27006306 (+) True LOC122342369
XM_043236145.1 mRNA upstream 374379 26764953 ~ 26767173 (+) True LOC122342366
XM_043236142.1 mRNA upstream 714313 26382916 ~ 26427239 (+) True LOC122342362
XM_043236141.1 mRNA upstream 963934 26173194 ~ 26177618 (+) True LOC122342360
XM_043236137.1 mRNA upstream 1163929 25974877 ~ 25977623 (+) True LOC122342357
XM_043236149.1 mRNA downstream 66112 27207736 ~ 27210602 (+) True LOC122342370
XM_043236327.1 mRNA downstream 215188 27356812 ~ 27358163 (+) True LOC122342494
XM_043236150.1 mRNA downstream 222394 27364018 ~ 27371196 (+) True LOC122342372
XM_043236921.1 mRNA downstream 248715 27390339 ~ 27406088 (+) True LOC122342806
XM_043236927.1 mRNA downstream 248715 27390339 ~ 27406088 (+) False LOC122342806
unassigned_transcript_951 other upstream 2426 27139054 ~ 27139126 (+) True trnav-cac_2
unassigned_transcript_950 other upstream 3644 27137836 ~ 27137908 (+) True trnav-aac_8
unassigned_transcript_949 other upstream 4526 27136954 ~ 27137026 (+) True trnav-aac_7
unassigned_transcript_948 other upstream 5604 27135876 ~ 27135948 (+) True trnav-aac_6
unassigned_transcript_947 other upstream 6681 27134799 ~ 27134871 (+) True trnav-aac_5
unassigned_transcript_953 other downstream 82290 27223914 ~ 27223986 (+) True trnav-uac_5
TU46406 other downstream 215819 27357443 ~ 27358147 (+) False LOC122342494
TU46402 other downstream 224606 27366230 ~ 27367990 (+) False LOC122342372
TU46403 other downstream 224727 27366351 ~ 27367990 (+) False LOC122342372
TU46683 other downstream 1065334 28206958 ~ 28216248 (+) True G31614