RNA id: TU47352


Basic Information

Item Value
RNA id TU47352
length 799
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G32097
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10253 ~ 11051 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgttcactttcatttattatttttatttatttttttgtatgtttactcagttcattaaaaatagaatgaaaaaaaaataaacaaaacactatatatttattattttggacatttgtatttgaaactaaaatttgaaTATCCATATGTTCCATATCATTGTGCACCTGGATGCTCCCAGATGTCCCAGTAAAACACAAACTttcaaaaatgtccaaaaacgTTTTGTTAGAAGCTGTCTGGAATCTCAGGTCTATCCTCACCCAGTATGAGCTCTGTGCTGGGAGTGCTGCTGGCCGACCCCTGACTGACGGCCGCGTCGCTGCAGCCCGAGATCCCAGAGAACTTGGACTGGGCGACCACCTCCAGGTGATTGTGAGAAGGCTGGCTGTGCCACTGAGAGAAACCATCAGACAGATCTGCCGGGTATGAGGAACGAACGGAAACGAATTACTCATTTTAACCCAAATCTGGGTTTTGAACCTACAACAAGATCAATTTACTCCATTTGCTCCCTCGTAATCAGTGATTCCTTTCAGAAAGCAGCATGTTCATACAAGTTGAAATGAGAAGGTGTTTATGCGTGTTCGCTCAcctgcgcgcgcgtgtgtgttgttcaggtgtgtgtgtgtgtgtgagccgaGGACAGTGACGGCGCAGCAGTAGAGGCAGTTCTTCTCCGTGTGCTCCTGAAGGCCTGTGCTCTCGTCGGCTCCCAGCAGGTGGTGCTGCTCGAGCGGCTGCTGTTTAACAGCTCCGTTATACTCATCTGCGACTTCAGTAGAGGACCACAACACGCTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47353 lncRNA upstream 394 11445 ~ 11869 (-) True G32098
TU47354 lncRNA upstream 1652 12703 ~ 15305 (-) True G32099
TU47355 lncRNA upstream 5419 16470 ~ 17515 (-) True G32100
TU47357 lncRNA upstream 14463 25514 ~ 25892 (-) True G32102
TU47337 lncRNA upstream 151439 162490 ~ 204536 (-) True G32086
XM_043240864.1 mRNA upstream 64977 76028 ~ 81063 (-) True LOC122346175
XM_043239141.1 mRNA upstream 174287 185338 ~ 201609 (-) True LOC122345224
XM_043240216.1 mRNA upstream 194051 205102 ~ 222554 (-) True lifra
XM_043240630.1 mRNA upstream 228900 239951 ~ 261671 (-) True rictora
XM_043238360.1 mRNA upstream 251317 262368 ~ 272815 (-) False LOC122344789
TU47356 other upstream 9088 20139 ~ 23949 (-) True G32101
TU47358 other upstream 22728 33779 ~ 34717 (-) True G32103
TU47359 other upstream 24726 35777 ~ 36348 (-) True G32104
TU47390 other upstream 235892 246943 ~ 249755 (-) False rictora
XR_006251108.1 other upstream 1301553 1312604 ~ 1336184 (-) True castor1

Expression Profile