RNA id: XM_043240630.1


Basic Information

Item Value
RNA id XM_043240630.1
length 5185
RNA type mRNA
GC content 0.53
exon number 41
gene id rictora
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 239951 ~ 261671 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGAGGGGGAGCGTCTGCGCTCAAACATCGCGAGAGGTTACGAGAGTTCCGGTGTTGTGATGATGAACGTCCCTGCCAACATGGCGGTCAGCATCCGCGGCCGTCCGACCCGGAGTGTACGGATGAGAGGTCGGAATGACAGCGGGGAGGAGAATGTACCGCTGGATCTTACGCGGGAACCCTCTGATAACATGCGTGAGATCCTTCAGAACATCGCCAAATCTCACGGGGTTTCCAACATGAGGAAGCTTGGCCACCTGAACAACTTTGTTAAGCTCCTGAACAGTGTAAATAACTGTGAAGAGAAATTAGGATTTACATACGAGGAAATCATCATTTGTCTGCGCGTGGCCTTGCTGAATGAGGTGAAAGAGGTACGGGCTGCGGGTTTGAGAGCGCTAAGGTATCTGATCCGTGACAGCAGCGTCCTTCAGACAGTTCTTCAGCTGCAGGTGGATTACCTGATCTCCAGGTGTATTGACATTCAGCAGAGCAATGAGGTGGAGAGAACTCAAGCCCTCAGACTTGTCAGAAAGATGATAACAGTGAACGCACAGCTCTTTCCCAGCTCTTTAACGAACTCGCTGATCGCGGTGGGGAACGACGGGCTGCAAGAGAGAGATCGCATGGTTCGAGCCTGCATCGCCATCATTTGTGAACTCGCACTGAAGAACCCCGAGATTGTGGCCCAGCGGGGAGGTTTGAGCACCATCCTGAAGAACGTCATTGACTGTCAGCTGAGCCGCATCAACGAGGCCCTGATCACCACCATACTGCACCTGCTCAATCACCCACACACACGCCAGTACATACGTGCTGATGTTGAACTGGAGcaaattctTGCACCTTACACAGATTTTCACTACAGACACAGCCCTGACACAGCAGAGGCACAAATCAAGGAGGACAGAGAAGCTCGTTTTTTAGCCAGTAAAATGGCTATCATTGCAGCCTTCCGCTCGTGGTCAGGTATTATTAACCTGTGTAAATCAGGGAACTCAGGAGTCCAGTCTTTGATAGGCCTGCTTTGTATACCAAACATGGAAGTCAGGAAAGCCTTATTAGAGGTCATGTATGAGATCTTCAGGTTGCCTGTTCCTATAGTGACAGGAGATTTTGAGGAAGCCCTGCACAGCGTGGACCCCAGCAAGTTTCAGGACAGCTGGAGACTATCTGATGGGTTTGTAGCTGCAGAAGCCAAAGTCATATTGCCTCACAGAGCACGATCCAGACCAGACCTCATGGACAACTACCTGGCACTACTGCTGTCTGCCTTTATCAATAGTGGACTGCTGGAGGGTCTGGTGGAGGTAGTGACCAGCAGTGATGGACAGATATCAGTGAGGGCCACTATACTGCTTGGAGAACTTCTGCACATGGCCAATACGATTCTTCCTCACTCTCACAGTCATCACCTGCACTGTCTGCCCACGTTAATCAACATGGCTGCTTCCTTTGACATCTCTCAGGAGAAACGGCTGCGTGCCAGTGCAGCCGTGAACCACCTGAAGCGTTTCCACGAAAAGAAACGACGTGGCCCCAAACCTTATAGTCTTTACCTGGATCACATTCTGCGCAGGACGTCCAACTCCACTCACAAGAGAGAGCAGCACCAGCGTCCACAGAAGGACATCTACATTATGAAGGACACTGAAGAGGCGCTGATGATGAACTTGAGGGACAGTCAGATCCTCAACCACAAACATAACCTGGACTGGAACTGGATTCTGATCATCACTATACTGAAGtgGCCAAATGTGAACCTCAGAAACAACAAAGATGAGCAGATGCACAAGTTTGTAAGGAGGTTGCTGTATTTCTATAAGCCCAGCAGTAAGCTGTACTCGGCTCTGGAGCTGGATCACGCCAAAGCCAGACAGCTGGATGTAGCGGGCTGCCAGTTCAACCAGTTCCTCTTGGATTCAGAGGACGACGGTCAGGTGTATTTAGAAGAGCTTGTGAAGGATATCGTTCAGTGGCTCACATCCTCTTCTGGGCTTAAATCTGAACGCAGTCTCCATAGCAATGGCCTCCTCAGCACCCTCAGTCAGCACTACTTCCTGTTTCTGGGTACTCTGTCTGCACAACCATCCGGAGTCAAAATGCTGGAGAAATGTGGCGTTTTTCAGTGTCTCTTGAGCTTGTGCTCAATGAAAAACCAGGATCACCTGCTAAAACTAACGGTCTCCACTCTGGACTACAGCAGAGATGGACTCGCTCGAGTCATTCTGTCCAAGATCCTCACAGCAGCCACTGATAACTGCCGCCTCGCCACCAAACACCTGCGTGTGCTGCTGCTCGCGAACGTTGAGTTCTTCAGTAATTGGGGGATGGAGTTGCTAGTCACGCAGCTGCATGACCACAACAAAACCGTCTCTATGGAGGCGCTGGACATCCTGGATGAAGCCTGTGAAGAAAAGGCCAACTTGCACGCTCTGATCCACATGAAACCTGCTCTGTCTCACCTGGGAGAGAAAGgccttctgctgctgctgagGTTCCTGTCCATCCCAAAAGGCTTCTCTTACCTCAATGAAAGAGGCTACGTCAGCAAACAGCTGGATAAATGGCAGAAGgaGTACAATCTAAAGTATGTGGACATGATTGAGGAGCAGTTAAATGAAGCTCTCACAACATACCGCAAACCTGTTGACGGAGACAACTACGTCCGCCGCAGCAACCAAAGGTTACAGAGGCCAAATGTGTTTCTCCCTGTGCATTTATATGGGCAGTTGGTCCATGATAAAACCGGCTGCCTTCTGCTGGAAACTCAGGGTGTTATCCCGGATCTCAGCTATACAGTCCGATCTCCAGTATTGGATCATTTTGAGGGCATTAAACAGCTGAAAGCAGCGCTGTGGGCTCTGGGAAACATTGGCAGCTCAAACTGGGGCCTGAACCTTCTACAAGAGGAGAATGTGATTCCAGATATTATTGCTCTGGCTCAGCACTGTGAAGTTCTGTCCATACGTGGtacgtgtgtgtatgttctGGGGGTGATCAGCCGCACTCGGCAGGGCAGCGATGTGCTGAAGGCTTTGGGATGGGACTCTGTTGTTCGGCACAGCCGCAGGCAGCAGTGGCCCGTTGTCCCTGATGAAGTGGGCCCGCTGCCCAGTGAACTGTCATCTGTGCCCAGCACGCTCAGCCTCAACTCAGAGTCCACCAGCTCACGCCACAACAGCGAGAGTGAAAGTCAGCCCAgtttgtttttcatggaCGATGATCGTGAGGGTTTGGACATGTACGAGGACTCTTCTCTCGGTTTACACACGAAAACCTCAAAGGACAGAAGCCCCTTCACCATCCTGACTTCTTCACATCTCCGAACCCGATTTCTGAACTCCCTGTCTCTCCCCAGTAAGAAGGGACGGGGCCCCAGTGACACTAAAGGCACAACAAACGCAGGAAAATCTCCAGAGGAGCTCCGGCTCATGCGGCGCAACCGGACCATAACTGAGCCCTCAAACTACTCTCCAGGCCACTCGGGGCAGAGCGAGGTCTTTTATAATGGCAGTCGCATGCCTCGCAGCCCAACGGTCAGCCTTGAAACTTCGTTTGTGGGTATTAAAGCACTAGCAGAGCCGTACGGCACAGAGGGATGCTCGGATTTGGAAAGCAGAGGTCATCACAAGGCCGTGACACCGGGTGAGAGCCAGAGGGAGAGGAGCAGCAGGGAGCGTTTGACCTGCGACGGTGCGTCTGTGCTGCCCGGCGGGGGCACGTTTAAGAGCCGCAGTCATAGCTTCAACACGGACACCACCACCAGTGGCATCAGCTCCATGAGCTCCTCCCCTTCCCGAGAGCCCGCCTCCTCCATCGCCATGGATACGGACTGCGCCAGCCTCAACACGGTGGTCAGCgctaaaactgtgaaaatgcaaCACTCGCTCAGTCCTCAGTCCAACCACAACCACATCCTGTTGTCCAAGTCTAATTCCACCTCTCTGGTTCCTCCCGGGTCGGCTCACACGCTGCCGCGTAGGGCACAGTCGCTGAAGTCGCCCTCCGTGGCCACCATCAAGAGCCTGGTGGACTGCAGCTACATCTACACGAGCCCACGTGACGCCCTGGGTTACGCCACGCTAAAGCGCCTGCAGCAGCAGAGGATCCACCCGTCCCTGTCACACAGCGAAGCGCTGGCGTCTCCCGCTAAAGACGTGCTGTTTACAGACACCATCACCATGAAAACACGCAGCCTCGACTCCCGGCTCACGCCACGCAGGTTTTTGAAAGCTCTGAGTTTTGCGTCTCTGGATAAGGAGGACTTGTTGAGTCCGATCAATCACTCCACACTGCAGCGATCCTTTTCCCTGCGCTCCATGGTCTCCAGCGCCACCTTCGGCTGCAGTGAGGACTATATTGGCCTGGCACTGCCCCTGGACATCAACCACATGTTTCAGattcGAGAAACATCATATTTCCAGAAGAGAACAAGCCCCCCTGCTGGAGAAAAATCATCCAAGTTTCTTTTTGGAGAATCTGATGAAGCGTGTTGTGGTCCTCTACTGAAGTCGCAGATGAGTATAACGGAGCTGTTAAACAGCAGCCGCTCGGAGCAGCACCACCTGCTGGGAGCCGACGAGAGCACAGGCCTTCAGGAGCACACGGAGAAGAACTGCCTCTACTGCTGCGCCGTCACTGTCCtcggctcacacacacacacacacctgaacaacacacacgcgcgcgcagATCTGTCTGATGGTTTCTCTCAGTGGCACAGCCAGCCTTCTCACAATCACCTGGAGGTGGTCGCCCAGTCCAAGTTCTCTGGGATCTCGGGCTGCAGCGACGCCGGCCGTCAGTCAGGGTCGGCCAGCAGCACTCCCAGCACAGAGCTCATACTGGGTGGAAAAGCCATATCTGAGGACGGACCGGCCTGCAGAGTTCTGTTGAGGAAAGAGGTTCTGCGACTCGTCATCAACCTCAGCTCTTCAGTCGGCACCAAAGGACATGAAACCGGACTTCTCACGATAAAAGAGAAGTTTCCCTTCACGTTTGATGACATCTGCCTGTACTCTGAGGTCTCCTTCCTGCTGGCCAACTGCATGTTTTTCGTCTGGCTTCACGCCTTCATCCAAGAGCTCTTCCAGGACGTGCAGTTCATTCCGTTGTACGTCGAAGCTGAAGCGGTTTTGAATAAACCTTCACAAGCTGTCCCGGCGGACACAGAGGAGTCTTGA

Function

GO: NA

KEGG:

id description
K08267 RICTOR; rapamycin-insensitive companion of mTOR

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47337 lncRNA downstream 35415 162490 ~ 204536 (-) True G32086
TU47339 lncRNA downstream 35415 162490 ~ 204536 (-) False G32086
TU47357 lncRNA downstream 214059 25514 ~ 25892 (-) True G32102
TU47355 lncRNA downstream 222436 16470 ~ 17515 (-) True G32100
TU47354 lncRNA downstream 224646 12703 ~ 15305 (-) True G32099
TU47414 lncRNA upstream 89296 350967 ~ 352079 (-) True G32150
TU47396 lncRNA upstream 120381 382052 ~ 384236 (-) False kcnv2b
TU47450 lncRNA upstream 169959 431630 ~ 431890 (-) True G32177
TU47471 lncRNA upstream 194446 456117 ~ 482271 (-) True G32186
TU47475 lncRNA upstream 196809 458480 ~ 465004 (-) False G32187
XM_043240216.1 mRNA downstream 17397 205102 ~ 222554 (-) True lifra
XM_043239141.1 mRNA downstream 38342 185338 ~ 201609 (-) True LOC122345224
XM_043240864.1 mRNA downstream 158888 76028 ~ 81063 (-) True LOC122346175
XM_043238360.1 mRNA upstream 697 262368 ~ 272815 (-) False LOC122344789
XM_043238361.1 mRNA upstream 697 262368 ~ 272452 (-) True LOC122344789
XM_043238657.1 mRNA upstream 11497 273168 ~ 278284 (-) False c5h5orf34
XM_043238656.1 mRNA upstream 11497 273168 ~ 278284 (-) True c5h5orf34
XM_043238854.1 mRNA upstream 17280 278951 ~ 286298 (-) True paip1
TU47359 other downstream 203603 35777 ~ 36348 (-) True G32104
TU47358 other downstream 205234 33779 ~ 34717 (-) True G32103
TU47356 other downstream 216002 20139 ~ 23949 (-) True G32101
XR_006251108.1 other upstream 1050933 1312604 ~ 1336184 (-) True castor1
XR_006251110.1 other upstream 1050935 1312606 ~ 1336184 (-) False castor1
XR_006251109.1 other upstream 1050935 1312606 ~ 1336184 (-) False castor1
XR_006251111.1 other upstream 1060625 1322296 ~ 1336187 (-) False castor1
XR_006250937.1 other upstream 1080935 1342606 ~ 1354414 (-) False lrrc74b

Expression Profile