RNA id: XM_043240378.1


Basic Information

Item Value
RNA id XM_043240378.1
length 2960
RNA type mRNA
GC content 0.45
exon number 5
gene id kcnv2b
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 382052 ~ 387878 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTAAATAGGGTAGATTTAACCTCAGCAAAGCGCTGAGATTTACAGGCGCACGGTACACTAGCTATCCTCCTCGAGGAGGATAGCCGAAGACTGAAAGGATGTTCAACTTTCAGAGAAACAGGAGACAGAGCCTCTTTCCCAACTGCAAACTAGCAACCTCGGAGTCAACAGATGATGCGGTTCCATTCGCTAAACAGTGTTTGATGAAACATTGGAGCTCTCTGGGCGAACTGCAGACAGATATCTATGACATCTTTGGTGAAGATGAGGAGGTTGAGAAGCATCCGGAACCAACAATGTGGTTTTCAAGCGCCTCACCCAGCAGGAATTACATGCTCAACCTCAACGTTGGTGGAAAGTCCTACCATATCACCTATAAAATGGCAGCAAGATACCCCCAGAGTAGAATCGGACGTTTAGCCACCTATACGGACCTCAATATGAAGCTGAACCTCTGCGATGACTACGTGGTGAAGGACAATGAGTATTTCTTCGACCGAGACCCGGACGTCTTCAACAGCATCTTCAACTTTTACAGAACCGGTGTGCTGTGGATCAAGGACGAGCTTTGTCCGAGGAACTTTTTGGAGGAAATCAGTTATTGGGGCGTTCGGATCAAATACTCGCAGCGGTGCTGTCGGATCCTTCTCGAGGAGAAACACGACGAGCTGTGCGAACAGCTCAAGGTTGAGAAGGAACTGGAGGCGGAGGTGGACGTCGAAGACAGCGAGGAGGCGTTCAACGACATGTTCCTCGGCGAGAAGAGACGCTTGCTTTGGAACTTCATGGAGAAACCGTTCTCCTCAATCCCGGCGAAACTAATGGCGGTCGCCTCGAGTATGTTTGTGCTGGTGTCGCTGGTTACAATGACTCTGACTACAGTAGAAGAAATGGAGAACATGGCATCTAACGAGTTCAGCGGAAAGCCGTTTGGAGAGTTCATAGAGACACTGTGCATAACCTTCTTTACCGCTGAGTACCTGCTGCGTCTAGTTTCAACCCCAGATATCTGTTGCTTCATTAAGAGCATGCTAAACGCGGTTGACCTCCTGGCCATTCTACCGCAGTTCCTCCAGTTGGTGTTAGAAAGCTTTGAGACCTTCAGTTCTGGGACACAAACCACGGACATGGAGACTGTTGGTCAGATGAGCAAGGTGGGACAAGTGTTACGAATCATGCGCCTAATGCGTATTTTTCGTGTTCTTAAACTGGCACGTCACTCGACGGGGCTCAAAGCATTTGGCTTCACATTGAGGCAGTGCTATCAGCAGGTGGGATGTCTCTTCCTCTTTATCGCCATGGGGATCTTCACATTCTCCGCCATGGTTTATACCGTTGAACATGACGTCCCTCAAACCAAGTTCACCAGTATTCCACATTCTTGGTGGTGGGCATCTGTTAGCATCTCTACTGTAGGTTATGGTGACATGTATCCAGAGACTCTTTTGGGGAGGATATTTGCCTTTGGCTGCATTTCCTTTGGGATCATTCTGAACGGCCTTCCAATCTCCATCCTCTTCAATAAGTTCTCCGATTACTACGCCAAACTGAAGTCTCACGAATACAGTTCCAACATGAAAAACAGAGGAAAGGTTAACTTCATCCTGAGAGCCAAGAAGAAACTCAAGGAGTGTGGCTGCATTGAAACTAATGACACTGACGTGTCGTGAAATCAGTATTATCGATTGTTGGCATTATTAAGCTGTTCTGAATCTTGTCTGAATGAGATCATTTTCTAAAGAGCCTCTTATCTGAAAGTGccaaaagaaatattaaaacaggtAATAAGTAACGCTGGTTTAAATTGTAAAGTGGTACAGAAGTCTTCTGTCATTCCTCATCTCCTGTTCCTTGTGCTTTATCGGTTGTTTAGCTTTTATAGCGTGAGCAAATCTTTGACAATAAAGTTGTACTACTACAGCATTTGAAGTAGCCAAAATCGTATTGTGCTTTATTTCCTCATTTTGGCTACAGAATCACATTTAGCCACAAAACACTGACGCTAACCTGCATTATCTTCACTGTTGACGTTATGCCTAACCTGGACTTTTGAACTTGACCCGAATGACAACCAAAATAGAAGATTAATCTAATTTACAGAGTTCCCATGACGCGTCCAATTAACCGAATTAACACTGTATTTAGCCTCCAAAGACCAGGCAATACCTTATTTGTTCTAAGCAAATctaatggttttgttttttgaggcCGTACAAATCTTTTGGCTCCATTGTTAGGTCAAATGTTCACAACACTCTTCTTGTTCAGAAGGAGTAACAAAAATCGACAAAAACCTCCACATAAAACAGGAGGAAACCTTGGCTGAGACAAACGTCCTCTCTCGTGATATATTTTAGTTACGTGTGTATTTACAATATGACATCGACGAGTGAATGGATAAACAACGAAGAGCCTCTGTTTTGCTCGCGCTGCTGCTCTCCAGGCCTGGAGAGGGCGGCGTGACGTCACCGCGCTCATAAGCGTCACTTCCTCGCGTCGCGCGCTCGCGTTTCTCTGACCTCTGAAAGACGGAGCGCGGTGCTGAAGCCCAGCGAAATGGCTCCTCCAGTGCAAGTGTCGCCGCTGATTAAGacagCCAGGTGGTCTGCTTTGCTTATTGGCGTTATCTACGGAAAGCGCAGATATGATCATCTGAAACCGATtgcagaggaggagaggagaatagaagaggaggagaagaaggtACGAGAGGAGAAGGAACGCATTGCTAAACAGCTAGCAGAAGcTAGTGAGGACACAATCTTAAAGTGAGCTGCCCGAAACGACACCCGCATCACTCATGTTGTAAAGATCGTGTTACCTGTCTGGATAAAGAATGATGCTTGTATTTTGCCACTTTGGTTTTACAGTGCCCTTTCACTTCTCATGTTAGATTAATGCCGCATTTGTGAAATAACTCAATACATGCaaatatgtgtataaatttCTTCTGATCTGA

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0051260 protein homooligomerization biological_process
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005251 delayed rectifier potassium channel activity molecular_function

KEGG:

id description
K04935 KCNV2, KV8.2; potassium channel subfamily V member 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47414 lncRNA downstream 30766 350967 ~ 352079 (-) True G32150
TU47337 lncRNA downstream 178309 162490 ~ 204536 (-) True G32086
TU47339 lncRNA downstream 178309 162490 ~ 204536 (-) False G32086
TU47357 lncRNA downstream 356953 25514 ~ 25892 (-) True G32102
TU47355 lncRNA downstream 365330 16470 ~ 17515 (-) True G32100
TU47450 lncRNA upstream 43752 431630 ~ 431890 (-) True G32177
TU47471 lncRNA upstream 68239 456117 ~ 482271 (-) True G32186
TU47475 lncRNA upstream 70602 458480 ~ 465004 (-) False G32187
TU47477 lncRNA upstream 76136 464014 ~ 479881 (-) True G32187
TU47481 lncRNA upstream 77186 465064 ~ 470468 (-) True G32191
XM_043240377.1 mRNA downstream 10027 371671 ~ 372818 (-) False LOC122345880
XM_043240376.1 mRNA downstream 10027 371671 ~ 372818 (-) True LOC122345880
XM_043240367.1 mRNA downstream 43114 316841 ~ 339731 (-) True adamts12
XM_043238651.1 mRNA downstream 69817 301638 ~ 313028 (-) True fgf10b
XM_043238853.1 mRNA downstream 83464 287133 ~ 299381 (-) True mybbp1a
XM_043240769.1 mRNA upstream 10541 398419 ~ 399683 (-) True si:ch211-12e13.10
XM_043240768.1 mRNA upstream 12114 399992 ~ 411093 (-) False lrp13
XM_043240767.1 mRNA upstream 12114 399992 ~ 411093 (-) True lrp13
XM_043239490.1 mRNA upstream 99166 487044 ~ 511879 (-) False gak
XM_043239489.1 mRNA upstream 99166 487044 ~ 511879 (-) True gak
TU47390 other downstream 133090 246943 ~ 249755 (-) False rictora
TU47359 other downstream 346497 35777 ~ 36348 (-) True G32104
TU47358 other downstream 348128 33779 ~ 34717 (-) True G32103
TU47356 other downstream 358896 20139 ~ 23949 (-) True G32101
XR_006251108.1 other upstream 924726 1312604 ~ 1336184 (-) True castor1
XR_006251110.1 other upstream 924728 1312606 ~ 1336184 (-) False castor1
XR_006251109.1 other upstream 924728 1312606 ~ 1336184 (-) False castor1
XR_006251111.1 other upstream 934418 1322296 ~ 1336187 (-) False castor1
XR_006250937.1 other upstream 954728 1342606 ~ 1354414 (-) False lrrc74b

Expression Profile