Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU48107 |
| length | 303 |
| lncRNA type | inter_gene |
| GC content | 0.64 |
| exon number | 2 |
| gene id | G32654 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056703.1 |
| NCBI id | CM032072.1 |
| chromosome length | 32833783 |
| location | 1848824 ~ 1882392 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | description |
|---|---|
| ko04710 | Circadian rhythm |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48023 | lncRNA | downstream | 52267 | 1794504 ~ 1796557 (-) | True | G32596 |
| TU48007 | lncRNA | downstream | 81944 | 1766598 ~ 1766880 (-) | True | G32586 |
| TU48004 | lncRNA | downstream | 85176 | 1763275 ~ 1763648 (-) | True | G32583 |
| TU48002 | lncRNA | downstream | 85995 | 1762478 ~ 1762829 (-) | True | G32581 |
| TU48000 | lncRNA | downstream | 88967 | 1759644 ~ 1759857 (-) | True | G32579 |
| TU48138 | lncRNA | upstream | 83937 | 1966329 ~ 1966532 (-) | True | G32675 |
| TU48147 | lncRNA | upstream | 113884 | 1996276 ~ 1996736 (-) | False | G32681 |
| TU48146 | lncRNA | upstream | 113919 | 1996311 ~ 1996843 (-) | True | G32681 |
| TU48148 | lncRNA | upstream | 117493 | 1999885 ~ 2000457 (-) | True | G32682 |
| TU48158 | lncRNA | upstream | 134986 | 2017378 ~ 2030493 (-) | True | G32688 |
| XM_043239640.1 | mRNA | downstream | 63435 | 1780165 ~ 1785389 (-) | True | ube2l3b |
| XM_043240861.1 | mRNA | downstream | 77032 | 1769436 ~ 1771792 (-) | True | sdf2l1 |
| XM_043238199.1 | mRNA | downstream | 103128 | 1733099 ~ 1745696 (-) | True | top3b |
| XM_043240215.1 | mRNA | downstream | 116687 | 1721233 ~ 1732137 (-) | True | ppm1f |
| XM_043240297.1 | mRNA | downstream | 130923 | 1696432 ~ 1717901 (-) | True | mapk1 |
| XM_043238324.1 | mRNA | upstream | 11388 | 1893780 ~ 1898590 (-) | True | LOC122344761 |
| XM_043238158.1 | mRNA | upstream | 137704 | 2020096 ~ 2022922 (-) | True | LOC122344636 |
| XM_043238500.1 | mRNA | upstream | 170313 | 2052705 ~ 2058733 (-) | True | LOC122344882 |
| XM_043240718.1 | mRNA | upstream | 205393 | 2087785 ~ 2090156 (-) | True | LOC122346063 |
| XM_043240213.1 | mRNA | upstream | 207760 | 2090152 ~ 2099181 (-) | True | LOC122345768 |
| TU47988 | other | downstream | 154850 | 1674490 ~ 1693974 (-) | False | ypel1 |
| XR_006250937.1 | other | downstream | 494410 | 1342606 ~ 1354414 (-) | False | lrrc74b |
| XR_006251111.1 | other | downstream | 512637 | 1322296 ~ 1336187 (-) | False | castor1 |
| XR_006251110.1 | other | downstream | 512640 | 1312606 ~ 1336184 (-) | False | castor1 |
| TU48139 | other | upstream | 84245 | 1966637 ~ 1967748 (-) | False | G32676 |
| TU48140 | other | upstream | 84245 | 1966637 ~ 1967748 (-) | True | G32676 |
| TU48163 | other | upstream | 137716 | 2020108 ~ 2022894 (-) | False | LOC122344636 |
| TU48378 | other | upstream | 614112 | 2496504 ~ 2554146 (-) | True | G32857 |
| TU48396 | other | upstream | 698156 | 2580548 ~ 2585426 (-) | False | snrnp27 |
