RNA id: TU48427



Basic Information


Item Value
RNA id TU48427
length 608
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G32884
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 2769201 ~ 2770371 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


acagagacacagacacagacacacacacacacacacacacacacacacatacagagacacagacacacacacgcacaaacacatacacacagacacacacacacaaacagagacacacacacagagacacacacacacacatacagagagagacacacacacacatacatacagagacacagacacagacacacacacacacacatacagagacacagacacacacgcgcacaaacacatacacacagacacacacacacacaaacagagacacacacacagagacacacacacacacagtgataaTACCACACCTGGAGAGCTGGATCAATCATTTCTTCATCTCACAACAAACACTACACTTCTAGAAACAGATCAGTGTGTTCTTCAGAGGATGCTGACAGCGGTCCCCCTGCATCCCGGAGCCAGAGCCCTTTCGACTCGACACACGTCAACCTTGTGTGAACACGCTCTGTTCACATTAATATTAGGaatttaaagtgttttgagAAGTGCTGGGCTGGTACTTTTCAAACGATCACATCTATaacaaatgtagtttttgtttcCATCATATATGTGACCagaataaatgagctttccaCCGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU48423 lncRNA downstream 2430 2765283 ~ 2766771 (-) True G32882
TU48406 lncRNA downstream 40394 2652444 ~ 2728807 (-) True G32870
XR_006251082.1 lncRNA downstream 333501 2433286 ~ 2435700 (-) True LOC122346060
TU48232 lncRNA downstream 344389 2422985 ~ 2424812 (-) True G32740
XR_006250936.1 lncRNA downstream 384500 2383907 ~ 2384701 (-) True LOC122344845
TU48461 lncRNA upstream 166110 2936481 ~ 2936938 (-) True G32906
XR_006251081.1 lncRNA upstream 178113 2948484 ~ 2950332 (-) True LOC122346059
TU48473 lncRNA upstream 212396 2982767 ~ 2984983 (-) True G32910
TU48477 lncRNA upstream 310536 3080907 ~ 3120371 (-) True G32914
TU48486 lncRNA upstream 405348 3175719 ~ 3176249 (-) True G32922
XM_043240111.1 mRNA downstream 159616 2607214 ~ 2609585 (-) True LOC122345702
XM_043239261.1 mRNA downstream 163287 2589701 ~ 2605914 (-) False add2
XM_043239255.1 mRNA downstream 163288 2587579 ~ 2605913 (-) False add2
XM_043240515.1 mRNA upstream 53800 2824171 ~ 2866043 (-) True tet3
XM_043240518.1 mRNA upstream 53800 2824171 ~ 2855093 (-) False tet3
XM_043240517.1 mRNA upstream 53800 2824171 ~ 2855093 (-) False tet3
XM_043240516.1 mRNA upstream 53800 2824171 ~ 2845284 (-) False tet3
XM_043240519.1 mRNA upstream 53800 2824171 ~ 2843067 (-) False tet3
XR_006250982.1 other downstream 163286 2587553 ~ 2605915 (-) False add2
TU48396 other downstream 183775 2580548 ~ 2585426 (-) False snrnp27
TU48378 other downstream 215055 2496504 ~ 2554146 (-) True G32857
TU48163 other downstream 746307 2020108 ~ 2022894 (-) False LOC122344636
TU48140 other downstream 801453 1966637 ~ 1967748 (-) True G32676
TU48454 other upstream 165372 2935743 ~ 3012819 (-) False LOC122344624
TU48464 other upstream 181091 2951462 ~ 2960177 (-) True G32908
TU48805 other upstream 1115054 3885425 ~ 3894475 (-) False piwil2
TU48804 other upstream 1115179 3885550 ~ 3894475 (-) False piwil2
TU48820 other upstream 1374556 4144927 ~ 4193081 (-) True LOC122346168

Expression Profile