RNA id: TU48473



Basic Information


Item Value
RNA id TU48473
length 507
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G32910
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 2982767 ~ 2984983 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAAGATGGCGTCAGCTCTGGAGCCACTGCTCTCTGGCTGCATTTTTGGGCTTGTTGTTGTCTGTGTTTCGAACGCGTTCCGGCACGTTCTCCTCGTCCACTCGACCCAAAACCCCGGTTGCAGGAGCTTCTGAAGGACACCACTCCGTCGGATGATGGTCAGCCTGCGTTGCTTTCTGGAGTGAGGGATCTGTTCTGGACTGCTTGTTCCGACAGGTTCAAGCCGGACAGTGTTTTCACGCTTGCGTTTCCTTAACAGAAAGTCTACAGAAGCGCCGCTACAATTCTTTACAAAGATGCTCCATCTAAACGGATAACACCGAGCGCCAGAATCCAGGATTCTACCGGACTGACTGCTTTTGAGACGGGGCGGATAAGAGCGACACCCGAGGCTTTCGCGGCTCTACTTTCTCTTGGAGTAGTCGCCGTCTGTCGCACACCTCACCTCTTTGCTTTGGCGTGGCAGCCCTTCAGACGGGAGGGTCATTGGGTTAGAGGGATCTGTTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251081.1 lncRNA downstream 32435 2948484 ~ 2950332 (-) True LOC122346059
TU48461 lncRNA downstream 45829 2936481 ~ 2936938 (-) True G32906
TU48421 lncRNA downstream 185168 2749959 ~ 2797599 (-) True G32881
TU48477 lncRNA upstream 95924 3080907 ~ 3120371 (-) True G32914
TU48486 lncRNA upstream 190736 3175719 ~ 3176249 (-) True G32922
TU48580 lncRNA upstream 308623 3293606 ~ 3327241 (-) True G32999
TU48579 lncRNA upstream 355616 3340599 ~ 3343240 (-) True G32998
TU48594 lncRNA upstream 403301 3388284 ~ 3390379 (-) True G33008
XM_043240716.1 mRNA downstream 72385 2876309 ~ 2910382 (-) True kat6a
XM_043240521.1 mRNA downstream 107874 2866165 ~ 2874893 (-) True ap3m2
XM_043240516.1 mRNA downstream 137483 2824171 ~ 2845284 (-) False tet3
XM_043238144.1 mRNA upstream 15273 3000256 ~ 3012721 (-) False LOC122344624
XM_043238143.1 mRNA upstream 15273 3000256 ~ 3012721 (-) True LOC122344624
XM_043239626.1 mRNA upstream 37866 3022849 ~ 3089522 (-) True LOC122345463
XM_043238173.1 mRNA upstream 358576 3343559 ~ 3368707 (-) True gnb1l
XM_043238174.1 mRNA upstream 358577 3343560 ~ 3376526 (-) False gnb1l
TU48464 other downstream 22590 2951462 ~ 2960177 (-) True G32908
XR_006250982.1 other downstream 376852 2587553 ~ 2605915 (-) False add2
TU48396 other downstream 397341 2580548 ~ 2585426 (-) False snrnp27
TU48378 other downstream 428621 2496504 ~ 2554146 (-) True G32857
TU48163 other downstream 959873 2020108 ~ 2022894 (-) False LOC122344636
TU48805 other upstream 900442 3885425 ~ 3894475 (-) False piwil2
TU48804 other upstream 900567 3885550 ~ 3894475 (-) False piwil2
TU48820 other upstream 1159944 4144927 ~ 4193081 (-) True LOC122346168
TU48822 other upstream 1159944 4144927 ~ 4193081 (-) False LOC122346168
TU48823 other upstream 1159944 4144927 ~ 4193081 (-) False LOC122346168

Expression Profile