RNA id: TU50081



Basic Information


Item Value
RNA id TU50081
length 286
RNA type TUCP
GC content 0.50
exon number 2
gene id G33998
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7382346 ~ 7397153 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTTAGTTGTCCCTGAATATTCCTGAGCTGTTTCTGAGCCTCAGAAGCCTGGCGATTGGCATGGCTCAGCTGAATCTCCATCTCATTGAGGTCTCCCTCCATCTTCTTCTTGATTCTCAGGGCATCGTTCCTGCTCCTGACCTCAGAGTCCAGAGTGCTCTGCATGGATTCAATGACTCTCTGGCTGTTCCTCTTGATCTGCTCCATCTCCTCATCCTTCTCTGCAAGCTTCCTGTCAATCTCACTCTTGACCTGGTTAAGCTCAAGCTGGACACGGAGAATCTTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU50064 lncRNA downstream 45801 7334414 ~ 7336545 (-) True G33985
TU50023 lncRNA downstream 188133 7193976 ~ 7194213 (-) True G33947
TU49823 lncRNA downstream 331022 7050977 ~ 7051324 (-) True G33816
TU49781 lncRNA downstream 382962 6998360 ~ 6999384 (-) True G33788
TU49818 lncRNA downstream 393574 6988026 ~ 6988772 (-) True G33811
XR_006251018.1 lncRNA upstream 53224 7450377 ~ 7460111 (-) False LOC122345654
XR_006251019.1 lncRNA upstream 53224 7450377 ~ 7460111 (-) True LOC122345654
XR_006251016.1 lncRNA upstream 98461 7495614 ~ 7498788 (-) True LOC122345617
TU50121 lncRNA upstream 175007 7572160 ~ 7578212 (-) True G34025
TU50415 lncRNA upstream 245817 7642970 ~ 7644229 (-) True G34214
XM_043240529.1 mRNA downstream 38209 7340212 ~ 7344137 (-) True c9
XM_043240191.1 mRNA downstream 96315 7280445 ~ 7286031 (-) True ndor1
XM_043239709.1 mRNA downstream 219986 7157494 ~ 7162360 (-) True ier5l
XM_043240178.1 mRNA downstream 233809 7141629 ~ 7148537 (-) False crata
XM_043240177.1 mRNA downstream 233809 7141629 ~ 7148537 (-) True crata
XM_043239975.1 mRNA upstream 22134 7419287 ~ 7429466 (-) True LOC122345653
XM_043239974.1 mRNA upstream 41682 7438835 ~ 7449458 (-) True myhz2
XM_043239874.1 mRNA upstream 64108 7461261 ~ 7469157 (-) True taok3b
XM_043239901.1 mRNA upstream 78115 7475268 ~ 7479804 (-) True tescb
XM_043239906.1 mRNA upstream 104482 7501635 ~ 7504656 (-) False zmat5
XR_006251118.1 other downstream 259882 7122339 ~ 7122464 (-) True LOC122346223
XR_006251117.1 other downstream 260497 7121722 ~ 7121849 (-) True LOC122346221
XR_006251012.1 other downstream 439143 6930872 ~ 6943203 (-) False usp20
XR_006251011.1 other downstream 439154 6923430 ~ 6943192 (-) True usp20
TU49743 other downstream 556164 6824171 ~ 6826182 (-) True G33758
TU50440 other upstream 322543 7719696 ~ 7721463 (-) False si:dkey-220k22.3
TU50633 other upstream 1014729 8411882 ~ 8414806 (-) True G34372
TU50638 other upstream 1032547 8429700 ~ 8431575 (-) True timm8b
TU50888 other upstream 1277396 8674549 ~ 8677718 (-) False LOC122345093
TU50964 other upstream 1532317 8929470 ~ 8930053 (-) True G34580

Expression Profile