RNA id: TU50963



Basic Information


Item Value
RNA id TU50963
length 204
lncRNA type inter_gene
GC content 0.62
exon number 1
gene id G34579
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 8927213 ~ 8927416 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTTGTTGTAGCCAGGGACTGCGGTGGTCAGCTGGCAGACAGCAGGAATGTGGCCGTCTGGATGGGTGACGCAGATAGAGTCGGGGTGCAGGAGGCCCGAGCCTCCGTGCCGTACTCTCCACGCTTCCATCTCGTGATGTAACACCTGCCCATCGAATCGCTCCAGATCCTGCGGAGCGACCAGGGTCCGCACCTCAGCCAGCAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU50962 lncRNA downstream 182 8925670 ~ 8927031 (-) True G34578
TU50961 lncRNA downstream 1896 8925052 ~ 8925317 (-) True G34577
TU50959 lncRNA downstream 10282 8916532 ~ 8916931 (-) True G34575
TU50958 lncRNA downstream 21589 8905407 ~ 8905624 (-) True G34574
TU50957 lncRNA downstream 36865 8888986 ~ 8890348 (-) True G34573
TU50966 lncRNA upstream 5444 8932860 ~ 8933080 (-) True G34582
TU50967 lncRNA upstream 6495 8933911 ~ 8934139 (-) True G34583
TU50995 lncRNA upstream 61195 8988611 ~ 8991023 (-) True G34606
TU50996 lncRNA upstream 63685 8991101 ~ 8991313 (-) True G34607
TU50983 lncRNA upstream 85890 9013306 ~ 9060814 (-) True G34594
XM_043239771.1 mRNA downstream 50715 8871280 ~ 8876498 (-) True dpp7
XM_043239029.1 mRNA downstream 283423 8632895 ~ 8643790 (-) False tsc1a
XM_043239030.1 mRNA downstream 283568 8632895 ~ 8643645 (-) False tsc1a
XM_043239027.1 mRNA downstream 283568 8632895 ~ 8643645 (-) True tsc1a
XM_043239032.1 mRNA downstream 295887 8611512 ~ 8631326 (-) True ak8
XM_043238499.1 mRNA upstream 10838 8938254 ~ 8949378 (-) True stxbp1b
XM_043238146.1 mRNA upstream 64767 8992183 ~ 8997534 (-) True LOC122344627
XM_043240273.1 mRNA upstream 72075 8999491 ~ 9001555 (-) True LOC122345801
XM_043240272.1 mRNA upstream 74491 9001907 ~ 9008032 (-) False trafd1
XM_043240271.1 mRNA upstream 74491 9001907 ~ 9008032 (-) True trafd1
TU50888 other downstream 249495 8674549 ~ 8677718 (-) False LOC122345093
TU50638 other downstream 495638 8429700 ~ 8431575 (-) True timm8b
TU50633 other downstream 512407 8411882 ~ 8414806 (-) True G34372
TU50440 other downstream 1205750 7719696 ~ 7721463 (-) False si:dkey-220k22.3
TU50081 other downstream 1530060 7382346 ~ 7397153 (-) True G33998
TU50964 other upstream 2054 8929470 ~ 8930053 (-) True G34580
TU51091 other upstream 288092 9215508 ~ 9220507 (-) False vamp5
TU51236 other upstream 410412 9337828 ~ 9402623 (-) True G34789
XR_006251099.1 other upstream 1397699 10325115 ~ 10335342 (-) False si:dkey-96l17.6
TU51745 other upstream 1533792 10461208 ~ 10461709 (-) True G35122