RNA id: TU50996



Basic Information


Item Value
RNA id TU50996
length 213
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G34607
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 8991101 ~ 8991313 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAACTATCAGTTTACAGATTTTATCGTCCATTCATGATCTTTATTGTCGACCAGGGAACTGACAACATACTTTTCATGGGAAAAATTGTCAATCCAGTGGAAAAGCAGTGATGTGAAATTCAAGGTATCATAAATTTTAAATGGCCATGATTTTGTAGAAATGCTGGCATATGTGTGAACAGTTTGAACTTAAACGCCTTTCggaaaaaaggc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU50995 lncRNA downstream 78 8988611 ~ 8991023 (-) True G34606
TU50967 lncRNA downstream 56962 8933911 ~ 8934139 (-) True G34583
TU50966 lncRNA downstream 58021 8932860 ~ 8933080 (-) True G34582
TU50963 lncRNA downstream 63685 8927213 ~ 8927416 (-) True G34579
TU50962 lncRNA downstream 64070 8925670 ~ 8927031 (-) True G34578
TU50983 lncRNA upstream 21993 9013306 ~ 9060814 (-) True G34594
TU51125 lncRNA upstream 255607 9246920 ~ 9248041 (-) True G34704
TU51339 lncRNA upstream 772760 9764073 ~ 9764532 (-) True G34869
TU51341 lncRNA upstream 774955 9766268 ~ 9766607 (-) True G34871
TU51347 lncRNA upstream 786320 9777633 ~ 9778238 (-) True G34877
XM_043238499.1 mRNA downstream 41723 8938254 ~ 8949378 (-) True stxbp1b
XM_043239771.1 mRNA downstream 114603 8871280 ~ 8876498 (-) True dpp7
XM_043239029.1 mRNA downstream 347311 8632895 ~ 8643790 (-) False tsc1a
XM_043238146.1 mRNA upstream 870 8992183 ~ 8997534 (-) True LOC122344627
XM_043240273.1 mRNA upstream 8178 8999491 ~ 9001555 (-) True LOC122345801
XM_043240272.1 mRNA upstream 10594 9001907 ~ 9008032 (-) False trafd1
XM_043240271.1 mRNA upstream 10594 9001907 ~ 9008032 (-) True trafd1
XM_043240456.1 mRNA upstream 31239 9022552 ~ 9023686 (-) True LOC122345922
TU50964 other downstream 61048 8929470 ~ 8930053 (-) True G34580
TU50888 other downstream 313383 8674549 ~ 8677718 (-) False LOC122345093
TU50638 other downstream 559526 8429700 ~ 8431575 (-) True timm8b
TU50633 other downstream 576295 8411882 ~ 8414806 (-) True G34372
TU50440 other downstream 1269638 7719696 ~ 7721463 (-) False si:dkey-220k22.3
TU51091 other upstream 224195 9215508 ~ 9220507 (-) False vamp5
TU51236 other upstream 346515 9337828 ~ 9402623 (-) True G34789
XR_006251099.1 other upstream 1333802 10325115 ~ 10335342 (-) False si:dkey-96l17.6
TU51745 other upstream 1469895 10461208 ~ 10461709 (-) True G35122
TU52098 other upstream 1877051 10868364 ~ 10874064 (-) True G35371

Expression Profile