RNA id: XM_043239666.1


Basic Information

Item Value
RNA id XM_043239666.1
length 2576
RNA type mRNA
GC content 0.40
exon number 7
gene id slc25a15b
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10960311 ~ 10969118 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TAGGTTTGAATCGTCTCAGATTTGTTCAAACGATTCGTTTAAATGATTCGACTCCTTTGAACGATTCGTTCACGAACTAGACATCGCTATTCGCTACATCCCTTCTTACATGCGGACCCCTTCGAGAGGTCACGACTCATGTGATCGTAAATGTATCAGTTCAGTAAGGAGCCagcatgaataaaaacatctggCTACATATTTTCGTTGTAAGCGCCTTCGTGAAAAAAGATCTTTGATTTTGGATTTCTTTGGAGCACTTTTACTTCATCATGGCACCACATCCAGTGGTTCAGGCGATAATTGACCTCTCTGCTGGTGCTATAGGGGGCACAGCTTGTGTATTTAGCGGTCAACCTTTGGACACAGCTAAGGTGAAAATGCAGACATTCCCCACTTTGTACAGAGGCTTTGTGCACTGCTTTGTGTCTACATACAGACAGGTGGGCCTTCGAGGTCTGTATCAAGGTACCACCCCGGCCCTCATGGCCAACATCGCGGAGAACTCTGTGCTCTTCATGTGCTACGGCTTTTGCCAAGAGGTGGTTCGCTTCATCTCTGGTCAGGAGAAAGGGGCTGCGCTCAGTGACATGCAGAAAGCGTGTGCAGGCTCCGTGGCCTCTGTTTTCTCCTCTCTGGTCTTATGTCCCACTGAGCTGGTGAAGTGTCGACTGCAGGCCATGCACGAGATGGCGGCTTCAGGCAAGATCGCCCACAGTCAGAACACAGTTTGGTCCGTGATGAAGTCCATTATGCATAATGATGGTCCTGCGGGGTTCTTCCAGGGTTTAACCACCACAATTGCCCGTGAGGTGCCTGGATATTTCTGTTTCTTCGGAGCGTACgagctctgtcgctctctctttGCTGAGTACATGCACTGTGGCAAGGATGACATAGGTGTAGCCCCTATTGTGTTCAGTGGAGGTTTTGGGGGAGCTTGTCTCTGGCTTGTGGTTTACCCCATGGACTGTGTTAAATCCAGAATACAGGTCATGTCGATGACAGGCAAGCAGTCAGGCTTCTTCAAGACTTTCATGCATATCTTCAGAACGGAAGGTGTAAGGGCTTTATATTCCGGTCTGACTCCCACAATGATCCGTACGTTTCCAGCAAACGGTGCTCTGTTCTTAGGTTACGAAGCCAGCCGCAAAATCATGATGGCACAGTTTGACAGTTGACCCTAAACGGCACACTTATTTTCTCTGTTTggattttaagcatttttttaatgagctaGATCTAGTTCTCTATAGACAGTCTACATTATTTCAGTCAACCTGCCATGGTTTTCACACACTAAcgcacatttgttttatttatttgataacactttacagtaatgTTATACTTGTAATGCATCACTGAACACTGTGCAATTAGTTCTAGTTAAAGAATTTATCtaaattaatgtataaatacactatAGTTTTTTCATGATTTGTTCATAATGcgttaatgtaaatgtatacaacacaaaatgtaacaaattaggAGCAGAAGTAAACTTTTACATcgtaatgtataaaaaatgaactttactgtaaagtgttaccattattttttatgttaggTGTTTTTTATTTGCCTCAACCTTGGCCTGAGGGTCTAAAAACGTGTTATCTGGTGTGTTAGTAACATCCCATCACTCCTTCATGCCTACGATTGGAAACATGTACCCTATATACGTGCAGTTTTCAGGCTACCTCTATAGTCTTTGCCAGTTTCGCAGTCCTGTTAAATGAACTCTAACTATgcaattaagttttgaatgccaTTCTCTTGAATACAGACAAAAGGAACATCTGCCATTACTGAATGAGCCGACTGCCAACAAACCCAGTTTTCTAAATACACTAAATTTGTTTGATTGTTATAACCGTGAGCTtcgtgtatttgtatttttagtatttcaaatGAGGGAGAGAATGCCTTACTCGTTATTTCAAGATTTTCTTGAACTTTTAAATATGGTGGGATTCAAAAGCCTGAGACATTTTGCTTCTGAGTTGCGCTCCACAGAACAGTTCTAACAAGGAAATCCGTGTTTATGTGATAAACGTCACATTTGGTTACTGGATTGGTGAGCTAGATGTAGTGGAGAGTCACAAAAGTGTCTTATTCACTTGACTTTGCAacatttcttattcattttaaatgtttgaaagaactaaaccttttaaaatgtaccCCGTCGAAGTGACCCCATTGTATGTGGATTGTTTTTGTATGTGGAGCATATGCTCGTTACGTTCAGTCATTCTGCCAAAGAACATTTACACTCTACGTACATATttcaactaattaaaaaatgtactgaGTCAAGGAGTACAGTATAGCAGTATTATTGTGACATCGCTGTATTTGAAATGTACTGACTGTAAATATTCTGCAGTTTGATTTTGTTCCAAAAGAGTTCTGTTTGTATCATTAAACACCAAACTAACTCTTTACCAAACTGATGACTTCCTAAAACCAGGATtgcatttagatatttttagatttaattgaTGCAAAGTTTTCTGGAGAGAATTAAATTGTGCAAACGCGAATTAAAGTATGACAAAGCATATCAA

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU52130 lncRNA downstream 24115 10938695 ~ 10939486 (-) True G35388
TU52118 lncRNA downstream 29856 10932350 ~ 10933745 (-) True G35385
XR_006251094.1 lncRNA downstream 76863 10875648 ~ 10886738 (-) True LOC122346117
TU51839 lncRNA downstream 125304 10838005 ~ 10838297 (-) True G35203
TU51837 lncRNA downstream 130006 10832858 ~ 10833595 (-) True G35201
TU52162 lncRNA upstream 69572 11038690 ~ 11039232 (-) True G35410
TU52175 lncRNA upstream 91820 11060938 ~ 11062888 (-) True G35422
TU52176 lncRNA upstream 93782 11062900 ~ 11064447 (-) True G35423
TU52205 lncRNA upstream 133535 11102653 ~ 11124347 (-) True G35441
TU52234 lncRNA upstream 145892 11115010 ~ 11119227 (-) True G35467
XM_043238337.1 mRNA downstream 5630 10953770 ~ 10957971 (-) True mpdu1a
XM_043239137.1 mRNA downstream 45108 10908898 ~ 10918493 (-) True atp6v1aa
XM_043239136.1 mRNA downstream 45200 10908898 ~ 10918401 (-) False atp6v1aa
XM_043240653.1 mRNA downstream 63327 10894152 ~ 10900274 (-) True zdhhc23a
XM_043238365.1 mRNA downstream 70007 10890842 ~ 10893594 (-) False LOC122344793
XM_043239661.1 mRNA upstream 4095 10973213 ~ 10979926 (-) False si:ch211-114c12.2
XM_043239660.1 mRNA upstream 4095 10973213 ~ 10979926 (-) True si:ch211-114c12.2
XM_043239662.1 mRNA upstream 4095 10973213 ~ 10979920 (-) False si:ch211-114c12.2
XM_043239663.1 mRNA upstream 4095 10973213 ~ 10979917 (-) False si:ch211-114c12.2
XM_043239532.1 mRNA upstream 23623 10992741 ~ 11003177 (-) False tp53
TU52116 other downstream 37438 10923927 ~ 10926163 (-) True G35384
TU52098 other downstream 89537 10868364 ~ 10874064 (-) True G35371
TU51745 other downstream 501892 10461208 ~ 10461709 (-) True G35122
XR_006251099.1 other downstream 628259 10325115 ~ 10335342 (-) False si:dkey-96l17.6
TU51236 other downstream 1560978 9337828 ~ 9402623 (-) True G34789
TU52323 other upstream 450837 11419955 ~ 11467122 (-) False hmgn7
TU52322 other upstream 494713 11463831 ~ 11467122 (-) True hmgn7
TU52344 other upstream 614662 11583780 ~ 11652627 (-) True G35554
TU52507 other upstream 832196 11801314 ~ 11815810 (-) False msna
TU52701 other upstream 1196292 12165410 ~ 12169327 (-) False sh2d1aa

Expression Profile