RNA id: TU53475



Basic Information


Item Value
RNA id TU53475
length 703
RNA type TUCP
GC content 0.42
exon number 2
gene id G36298
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13717124 ~ 13718543 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TccacaatttgtttttattgtaaagtcTGGAGGTGGAGGGGTCAATCTtgcagcatttgttttttaaacaccGGATTTAAAACAAGaggaaaacacaaataaaacggtttacaaaacaaaaagaagatcTGTACAAGTTCACACTTTATCTTAGAAAAACTCAGCCAAGCCCAGGTTTGTGATTGCAGCAGCCACACTGAGGACCGTTCTGGTAATCAGCCAGTCAGAATTAAAGAACTGTGGAATAAAAACATGTTGATGTGCATGACAAAAGCAGTCCATCCATAGGCTCCATTAGGATGTGTTACGAGATGACTGCAGAGCTCACAGAGTTCAGTGTTTGCTCTTCTTGGTCTTTTTGTGCGAGCGATGTGGCGATCGGGACGATGACCTCCAGGATTTGTGCTGTGGTGATGGTGAGCGAGAGCGCTTTGACTTGCGTGGGGATCGGGATCTTGTTCTTCtctctcctctcttctttgTCTCGACTCCGTCCTCTACTCCTTTCTCTGTCCTCACTCTTTCTACTTTTTTCTTTATCCCTTGTTTTACTCCTGTCCTCCCCTTTATCTCTACGCTCATCTTTTTTGGACCgatctttctgtttttgtgaatatttgtcTCTCTTTTCCTGATCGTCCTTGTCAAACTCCTAAAGAAGCAGAGACAGAAAGTGAGTTTATTTACCAAAAGTGAAACATTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU53473 lncRNA downstream 3704 13712680 ~ 13713420 (-) True G36297
TU53382 lncRNA downstream 5165 13708100 ~ 13711959 (-) True G36224
TU53457 lncRNA downstream 73799 13642526 ~ 13643325 (-) False LOC122345175
XR_006250978.1 lncRNA downstream 73810 13619026 ~ 13643314 (-) True LOC122345175
TU53448 lncRNA downstream 79801 13633670 ~ 13637323 (-) True G36279
TU53531 lncRNA upstream 99705 13818248 ~ 13819334 (-) True G36337
TU53602 lncRNA upstream 256809 13975352 ~ 13977070 (-) False G36385
TU53605 lncRNA upstream 256809 13975352 ~ 13977070 (-) True G36385
TU53610 lncRNA upstream 256809 13975352 ~ 13977070 (-) False G36385
TU53878 lncRNA upstream 557553 14276096 ~ 14310067 (-) True G36541
XM_043239033.1 mRNA downstream 17908 13654294 ~ 13699216 (-) True lrch2
XM_043239036.1 mRNA downstream 17909 13654294 ~ 13699215 (-) False lrch2
XM_043239035.1 mRNA downstream 17909 13654294 ~ 13699215 (-) False lrch2
XM_043239034.1 mRNA downstream 17909 13654294 ~ 13699215 (-) False lrch2
XM_043239038.1 mRNA downstream 64073 13646648 ~ 13653051 (-) True il13ra2
XM_043238578.1 mRNA upstream 2238 13720781 ~ 13732483 (-) True wdr44
XM_043240423.1 mRNA upstream 126860 13845403 ~ 13848070 (-) True LOC122345901
XM_043240379.1 mRNA upstream 220098 13938641 ~ 13940216 (-) True chrm1b
XM_043239846.1 mRNA upstream 246612 13965155 ~ 13967827 (-) True LOC122345582
XM_043239548.1 mRNA upstream 268946 13987489 ~ 14000256 (-) True arhgap35b
XR_006250976.1 other downstream 17898 13659077 ~ 13699226 (-) False lrch2
XR_006250977.1 other downstream 17898 13659974 ~ 13699226 (-) False lrch2
TU53374 other downstream 134883 13579061 ~ 13582241 (-) True h3f3c
unassigned_transcript_955 other downstream 341424 13375629 ~ 13375700 (-) True trnap-agg_13
TU53125 other downstream 662267 13053844 ~ 13054857 (-) True G36047
TU53529 other upstream 99199 13817742 ~ 13818942 (-) True G36336
unassigned_transcript_956 other upstream 120347 13838890 ~ 13838962 (-) True trnam-cau_26
unassigned_transcript_957 other upstream 126344 13844887 ~ 13844959 (-) True trnam-cau_27
TU53547 other upstream 127835 13846378 ~ 13848059 (-) False LOC122345901
XR_006251003.1 other upstream 283391 14001934 ~ 14009536 (-) False tmprss13b

Expression Profile