RNA id: XM_043238973.1


Basic Information

Item Value
RNA id XM_043238973.1
length 1544
RNA type mRNA
GC content 0.39
exon number 9
gene id LOC122345141
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14292063 ~ 14302381 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTAAACCAAACCAGCAGATTCatcataaaatattgatttattctttgttttttaagaaatgcttAATAATAGTTCTACTTCCCTTTTGAGATCACTGCTATTCAGGACGTTTTGACTGGTTGGTTACATCTTGAAGGATGTGTTTCTTAAATGGAttaccatttttaatttaaaataacacaataaaataaccGCACCTATAGTTTAGGGATATGTAGAAAAAGACATGTTATTTCTGTTTGCAAGGCTGAAAATGGCAGAGTTTAAGCATATTCAGGACTCCAGCAGCAGCTCACAGAGCGATCTCTACTGTGTACTAAACGAAGATATAAACAGACCGTCTGAAAGGCCGTCACACACAAAGAAAGGTGGCTTGTGGAGTAAACAACATTGCTTTCTTCTGATGTGTGGCACTGTCATACTTTTCTCGGCTCTGTTAATCACAGTGTCTGTAAAATtgactGAAGTGGCCAATCAACAAGACCTGACAAAACACCAATACAGTAAACTGATTGAGATAGAGAATGAAGTGGCAAATCTGACATTGTCTTTAGCTTTGCTTTCTTCAAACCAACAAGATATATATGACAGATTTATCGAGATGTTTGGTGAACTGAAAGCTGATCTGAAGAGCAGGATAACAAATTTGACTCAGCATAAACCTGTTCTAAACTGCAAAGCTGGGTGGCAACTTTTTCTTTCCAACTGCTATCAATTTTCCAGTAATAAAGTGAGCTGGCAAACAGCGCGTTCATACTGCGATGGACAAGGGACCCTGCTGCTCATTCTGGGGGAGGACTCCAGGGAGTGGGATTTTATTGTGAAACACGCTGTCCATTCCTCTCAATCCTACTGGATTGGTCTGACAGATGCTATAACTGGCCACTGGAGATGGGTTGATGGAACACCGTACACCATGAACAGCAGtcagtGGGAACCTGGTGAACCAAATAATTGGTTGGGTGAAGAGGACTGTGGAGAACTAACCACATCTGGAAAACTGAATGATGGCCACTGCTCCaaaaatttcagttttatctGTAAAGCACCAGCTAATGAAAACTAACTAGTAATTATATAACTGTACTGTAATGCAGGTAAAACAgtactaatattctaataaatatacagaatgGTATGGTGagtattaaaaaatactatatataatatgacGCATCCCCTGCACTTTAAAAACAGGTGAATCTGTCCCCCGGCCTTTTTTAAATGCCCCATTACCAGTATTTCCTCCCGTGTTCCCTGATTTGTTGCTTATTTGAGGGAATTAACATTAAGCCAATCACAAGGCGAATCATCTCTTGGGTGCATCTTCTGTTGCTTTTGcaatttctttcattcatttaattcttTGCTCTGTGCTGGTCCAGGGTGAAATGCACCCAAGAAAAAGCAGAAGGCAATTACGTCTTTCATTCAAAGTGCATTATGTGTGTTAAATATGACCACAAAACTCTTATAGGACATGTGTATTTGtagccaaaaacacattgtatgggtcaaaattcttaaagatcatgttccatgaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU53857 lncRNA downstream 11233 14279674 ~ 14282516 (-) True znhit1
TU53602 lncRNA downstream 316679 13975352 ~ 13977070 (-) False G36385
TU53605 lncRNA downstream 316679 13975352 ~ 13977070 (-) True G36385
TU53610 lncRNA downstream 316679 13975352 ~ 13977070 (-) False G36385
TU53531 lncRNA downstream 474415 13818248 ~ 13819334 (-) True G36337
TU53914 lncRNA upstream 10823 14310624 ~ 14310860 (-) True G36561
TU53915 lncRNA upstream 11161 14310962 ~ 14311328 (-) True G36562
TU53864 lncRNA upstream 11967 14311768 ~ 14320994 (-) True G36537
TU53923 lncRNA upstream 49307 14349108 ~ 14349936 (-) True G36567
XR_006250925.1 lncRNA upstream 164503 14464304 ~ 14467777 (-) True LOC122344807
XM_043238380.1 mRNA downstream 11129 14280281 ~ 14282620 (-) False znhit1
XM_043238379.1 mRNA downstream 11129 14280281 ~ 14282620 (-) False znhit1
XM_043238372.1 mRNA downstream 19612 14240339 ~ 14274137 (-) True LOC122344799
XM_043238378.1 mRNA downstream 55403 14225990 ~ 14238346 (-) True atp1b2b
XM_043238279.1 mRNA downstream 73669 14212659 ~ 14220080 (-) True chrne
XM_043239122.1 mRNA upstream 34417 14334218 ~ 14346680 (-) False cnot6l
XM_043239121.1 mRNA upstream 34417 14334218 ~ 14346678 (-) True cnot6l
XM_043238385.1 mRNA upstream 193788 14493589 ~ 14500572 (-) True paqr3a
XM_043239516.1 mRNA upstream 273754 14573555 ~ 14616878 (-) True antxr2a
XM_043238705.1 mRNA upstream 406576 14706377 ~ 14717330 (-) True prkg2
XR_006250968.1 other downstream 237044 14045477 ~ 14056705 (-) False rnf214
XR_006250967.1 other downstream 237044 14045477 ~ 14056705 (-) True rnf214
XR_006251003.1 other downstream 284213 14001934 ~ 14009536 (-) False tmprss13b
XR_006251004.1 other downstream 284213 14003214 ~ 14009536 (-) False tmprss13b
TU53547 other downstream 445690 13846378 ~ 13848059 (-) False LOC122345901
XR_006251010.1 other upstream 906150 15205951 ~ 15264945 (-) False pdzd2
XR_006250970.1 other upstream 996217 15296018 ~ 15308440 (-) False zfr
XR_006251075.1 other upstream 1050215 15350016 ~ 15367413 (-) False npr3
TU54482 other upstream 1273310 15573111 ~ 15574817 (-) False alkbh2
TU54484 other upstream 1273457 15573258 ~ 15574817 (-) False alkbh2

Expression Profile