Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043240110.1 |
| length | 1011 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 11 |
| gene id | mrpl1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056703.1 |
| NCBI id | CM032072.1 |
| chromosome length | 32833783 |
| location | 14347562 ~ 14349991 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| K02863 | RP-L1, MRPL1, rplA; large subunit ribosomal protein L1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53805 | lncRNA | upstream | 727 | 14345884 ~ 14346835 (+) | True | G36510 |
| TU53804 | lncRNA | upstream | 3793 | 14343164 ~ 14343769 (+) | True | G36509 |
| TU53801 | lncRNA | upstream | 5055 | 14341923 ~ 14342507 (+) | True | G36507 |
| TU53790 | lncRNA | upstream | 9797 | 14333068 ~ 14337765 (+) | True | LOC122345214 |
| TU53787 | lncRNA | upstream | 12379 | 14333068 ~ 14335183 (+) | False | LOC122345214 |
| TU53936 | lncRNA | downstream | 115908 | 14465899 ~ 14466241 (+) | True | G36573 |
| TU53931 | lncRNA | downstream | 143557 | 14493548 ~ 14528933 (+) | True | G36570 |
| TU54016 | lncRNA | downstream | 377238 | 14727229 ~ 14727743 (+) | True | G36644 |
| TU54029 | lncRNA | downstream | 427970 | 14777961 ~ 14778375 (+) | True | G36653 |
| TU54024 | lncRNA | downstream | 462482 | 14812473 ~ 14815463 (+) | True | G36651 |
| XM_043239124.1 | mRNA | upstream | 13334 | 14333023 ~ 14334228 (+) | False | LOC122345214 |
| XM_043238535.1 | mRNA | upstream | 20795 | 14324343 ~ 14326767 (+) | True | LOC122344908 |
| XM_043240101.1 | mRNA | upstream | 24865 | 14321528 ~ 14322697 (+) | True | cxcl11.8 |
| XM_043240102.1 | mRNA | upstream | 24865 | 14321532 ~ 14322697 (+) | False | cxcl11.8 |
| XM_043238980.1 | mRNA | upstream | 26639 | 14315699 ~ 14320923 (+) | True | LOC122345144 |
| XM_043238214.1 | mRNA | downstream | 35676 | 14385667 ~ 14455284 (+) | True | fras1 |
| XM_043239706.1 | mRNA | downstream | 105426 | 14455417 ~ 14458914 (+) | True | LOC122345512 |
| XM_043239705.1 | mRNA | downstream | 109463 | 14459454 ~ 14463721 (+) | True | LOC122345511 |
| XM_043238383.1 | mRNA | downstream | 116517 | 14466508 ~ 14493471 (+) | False | bmp2k |
| XM_043238382.1 | mRNA | downstream | 116518 | 14466509 ~ 14493471 (+) | True | bmp2k |
| XR_006250972.1 | other | upstream | 42258 | 14300043 ~ 14305304 (+) | True | LOC122345142 |
| XR_006250973.1 | other | upstream | 42258 | 14300043 ~ 14305304 (+) | False | LOC122345142 |
| TU53776 | other | upstream | 55062 | 14290420 ~ 14292500 (+) | True | G36495 |
| TU53623 | other | upstream | 361856 | 13984097 ~ 13985706 (+) | True | ins |
| XR_006251084.1 | other | upstream | 1540346 | 12803952 ~ 12807216 (+) | False | LOC122346073 |
| TU54000 | other | downstream | 297498 | 14647489 ~ 14651911 (+) | False | fgf5 |
| TU54012 | other | downstream | 368541 | 14718532 ~ 14720487 (+) | True | G36640 |
| TU54916 | other | downstream | 2134011 | 16484002 ~ 16560732 (+) | False | G37227 |
| TU54918 | other | downstream | 2134011 | 16484002 ~ 16560732 (+) | True | G37227 |
| TU54920 | other | downstream | 2136629 | 16486620 ~ 16561741 (+) | True | G37228 |
