RNA id: TU54000



Basic Information


Item Value
RNA id TU54000
length 306
RNA type TUCP
GC content 0.49
exon number 2
gene id fgf5
representative False

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14645945 ~ 14652911 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGGGTTTTCAGCAACCGATTTCTAGCAATGAACAAGAGAGGGAGGCTTCATGCAACTGAGAGCTTCACAGATGACTGTAAGTTCAGGGAGCGCTTTCAGGAGAACAGCTACAACACGTACGCCTCAGTGGTCCACAAGAACCATCGCACTGGCAGAGAGTGGTTCGTGGCACTTAACAAGAGAGGTAAAGCAAAAATGGGGTCCAGTCCGAGAGTGAAGTCGCAGCACGTGTCTACACATTTTCTGCCGAGGATGAGCTCGCATGAAAAGACTGAACAAGGATTCACAATAACAGACAAAGAGCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU53931 lncRNA upstream 118556 14493548 ~ 14528933 (+) True G36570
TU53936 lncRNA upstream 181248 14465899 ~ 14466241 (+) True G36573
TU53922 lncRNA upstream 298700 14348245 ~ 14348789 (+) False mrpl1
TU53805 lncRNA upstream 300654 14345884 ~ 14346835 (+) True G36510
TU53804 lncRNA upstream 303720 14343164 ~ 14343769 (+) True G36509
TU54016 lncRNA downstream 75318 14727229 ~ 14727743 (+) True G36644
TU54029 lncRNA downstream 126050 14777961 ~ 14778375 (+) True G36653
TU54024 lncRNA downstream 160562 14812473 ~ 14815463 (+) True G36651
TU54033 lncRNA downstream 165828 14817739 ~ 14818269 (+) True G36657
TU54072 lncRNA downstream 267044 14918955 ~ 14919941 (+) True G36692
XM_043238346.1 mRNA upstream 11713 14630922 ~ 14635776 (+) True prdm8b
XM_043238345.1 mRNA upstream 11713 14630979 ~ 14635776 (+) False prdm8b
XM_043238383.1 mRNA upstream 154018 14466508 ~ 14493471 (+) False bmp2k
XM_043238382.1 mRNA upstream 154018 14466509 ~ 14493471 (+) True bmp2k
XM_043238384.1 mRNA upstream 154018 14466509 ~ 14493471 (+) False bmp2k
XM_043238658.1 mRNA downstream 2690 14654601 ~ 14699071 (+) True cfap299
XM_043238708.1 mRNA downstream 48993 14700904 ~ 14706295 (+) True bmp3
XM_043239587.1 mRNA downstream 138955 14790866 ~ 14794659 (+) True tmem175
XM_043240088.1 mRNA downstream 228964 14880875 ~ 14898825 (+) True cspg4ba
XM_043240089.1 mRNA downstream 228964 14880875 ~ 14898825 (+) False cspg4ba
XR_006250972.1 other upstream 342185 14300043 ~ 14305304 (+) True LOC122345142
XR_006250973.1 other upstream 342185 14300043 ~ 14305304 (+) False LOC122345142
TU53776 other upstream 354989 14290420 ~ 14292500 (+) True G36495
TU53623 other upstream 661783 13984097 ~ 13985706 (+) True ins
XR_006251084.1 other upstream 1840273 12803952 ~ 12807216 (+) False LOC122346073
TU54012 other downstream 66621 14718532 ~ 14720487 (+) True G36640
TU54916 other downstream 1832091 16484002 ~ 16560732 (+) False G37227
TU54918 other downstream 1832091 16484002 ~ 16560732 (+) True G37227
TU54920 other downstream 1834709 16486620 ~ 16561741 (+) True G37228
TU55097 other downstream 2712958 17364869 ~ 17369768 (+) False LOC122344991

Expression Profile