RNA id: TU54076



Basic Information


Item Value
RNA id TU54076
length 218
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G36696
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14698736 ~ 14698953 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ataatatttaacattaatagttcacagcattactgtttttactgtattttgttaaTATACAACCTTTGACAGCATTacagacttctttcaaaaacatctttctggccccaaacttttgaatggtgatGTATTACTAACACAAAATCAAACCAAGAAATCGAAGCAGCAAATTTGTACGGATGAAGTACAGTTTGTTTCAATGACAGTCTGCATATTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU54002 lncRNA downstream 46343 14652095 ~ 14652393 (-) True G36631
TU53966 lncRNA downstream 210008 14485814 ~ 14488728 (-) True G36602
XR_006250925.1 lncRNA downstream 230959 14464304 ~ 14467777 (-) True LOC122344807
XR_006250924.1 lncRNA downstream 232411 14464304 ~ 14466325 (-) False LOC122344807
TU53923 lncRNA downstream 348800 14349108 ~ 14349936 (-) True G36567
TU54099 lncRNA upstream 181912 14880865 ~ 14881065 (-) True G36708
TU54112 lncRNA upstream 206432 14905385 ~ 14905621 (-) True G36714
TU54241 lncRNA upstream 470094 15169047 ~ 15169358 (-) True G36811
TU54472 lncRNA upstream 862769 15561722 ~ 15562078 (-) True G36967
TU54473 lncRNA upstream 863195 15562148 ~ 15562363 (-) True G36968
XM_043239516.1 mRNA downstream 81858 14573555 ~ 14616878 (-) True antxr2a
XM_043238385.1 mRNA downstream 198164 14493589 ~ 14500572 (-) True paqr3a
XM_043239122.1 mRNA downstream 352056 14334218 ~ 14346680 (-) False cnot6l
XM_043239121.1 mRNA downstream 352058 14334218 ~ 14346678 (-) True cnot6l
XM_043238973.1 mRNA downstream 398935 14293749 ~ 14299801 (-) False LOC122345141
XM_043238705.1 mRNA upstream 7424 14706377 ~ 14717330 (-) True prkg2
XM_043238706.1 mRNA upstream 19571 14718524 ~ 14778259 (-) True rasgef1ba
XM_043238707.1 mRNA upstream 19571 14718524 ~ 14737308 (-) False rasgef1ba
XM_043239588.1 mRNA upstream 96396 14795349 ~ 14810245 (-) True cds1
XM_043240085.1 mRNA upstream 113604 14812557 ~ 14875477 (-) True wdfy3
TU53907 other downstream 396355 14292063 ~ 14302381 (-) True LOC122345141
XR_006250968.1 other downstream 642031 14045477 ~ 14056705 (-) False rnf214
XR_006250967.1 other downstream 642031 14045477 ~ 14056705 (-) True rnf214
XR_006251003.1 other downstream 689200 14001934 ~ 14009536 (-) False tmprss13b
XR_006251010.1 other upstream 506998 15205951 ~ 15264945 (-) False pdzd2
XR_006250970.1 other upstream 597065 15296018 ~ 15308440 (-) False zfr
XR_006251075.1 other upstream 651063 15350016 ~ 15367413 (-) False npr3
TU54482 other upstream 874158 15573111 ~ 15574817 (-) False alkbh2
TU54484 other upstream 874305 15573258 ~ 15574817 (-) False alkbh2