RNA id: TU54099



Basic Information


Item Value
RNA id TU54099
length 201
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G36708
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14880865 ~ 14881065 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTTTTGCGAGTCCGACGAAAAGCAAGAGTAGTCCGCTTAAAAGGGTCGCCCTCATTTTAACATCAATGCAGTCTGATCATTCGGCTTGAAATAAAGAAACGGCGTGTTTAAAATTCATTGTGTCGCCAAATTCACGGCGGTTCGTTTAACGCCTCACTTTAAAATCTTTCCACAAACTTGTGTGTTCGAGCAGCAAGCGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU54076 lncRNA downstream 181912 14698736 ~ 14698953 (-) True G36696
TU54002 lncRNA downstream 228472 14652095 ~ 14652393 (-) True G36631
TU53966 lncRNA downstream 392137 14485814 ~ 14488728 (-) True G36602
XR_006250925.1 lncRNA downstream 413088 14464304 ~ 14467777 (-) True LOC122344807
XR_006250924.1 lncRNA downstream 414540 14464304 ~ 14466325 (-) False LOC122344807
TU54112 lncRNA upstream 24320 14905385 ~ 14905621 (-) True G36714
TU54241 lncRNA upstream 287982 15169047 ~ 15169358 (-) True G36811
TU54472 lncRNA upstream 680657 15561722 ~ 15562078 (-) True G36967
TU54473 lncRNA upstream 681083 15562148 ~ 15562363 (-) True G36968
TU54475 lncRNA upstream 683033 15564098 ~ 15565262 (-) True G36969
XM_043240090.1 mRNA downstream 792 14876022 ~ 14880073 (-) True si:dkey-193c22.1
XM_043240085.1 mRNA downstream 5388 14812557 ~ 14875477 (-) True wdfy3
XM_043240082.1 mRNA downstream 8539 14812557 ~ 14872326 (-) False wdfy3
XM_043240086.1 mRNA downstream 8540 14812557 ~ 14872325 (-) False wdfy3
XM_043240083.1 mRNA downstream 8540 14812557 ~ 14872325 (-) False wdfy3
XM_043239465.1 mRNA upstream 25519 14906584 ~ 14917764 (-) True snx18a
XM_043239467.1 mRNA upstream 37861 14918926 ~ 14919939 (-) True hspb3
XM_043240362.1 mRNA upstream 135834 15016899 ~ 15023456 (-) False fsta
XM_043240363.1 mRNA upstream 135834 15016899 ~ 15023456 (-) True fsta
XM_043238533.1 mRNA upstream 240931 15121996 ~ 15128172 (-) True isl1a
TU53907 other downstream 578484 14292063 ~ 14302381 (-) True LOC122345141
XR_006250968.1 other downstream 824160 14045477 ~ 14056705 (-) False rnf214
XR_006250967.1 other downstream 824160 14045477 ~ 14056705 (-) True rnf214
XR_006251003.1 other downstream 871329 14001934 ~ 14009536 (-) False tmprss13b
XR_006251010.1 other upstream 324886 15205951 ~ 15264945 (-) False pdzd2
XR_006250970.1 other upstream 414953 15296018 ~ 15308440 (-) False zfr
XR_006251075.1 other upstream 468951 15350016 ~ 15367413 (-) False npr3
TU54482 other upstream 692046 15573111 ~ 15574817 (-) False alkbh2
TU54484 other upstream 692193 15573258 ~ 15574817 (-) False alkbh2

Expression Profile