RNA id: TU54664



Basic Information


Item Value
RNA id TU54664
length 1019
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G37064
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15812915 ~ 15813933 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


cGAGCCTTAAAACTCACAAGCAAGGGAGCAACGTTTACGATCGCTTAACGGCATGGAGACGACAGACTTGTGAAAACAAAAGTGGGAAGACGGGTTAAGGTGACAGATGAAGGCAATTACGCCGTTTTTCAACACTTCCTGCAGGAGTACTGAGGACACAGATCTAAAGGTGAGTGTCGGCCGGTGACTATGAACTACAGGACGGCAGCTGCTCTTCCTTTTAGACGAAAAGTCCCATGTGAGGGATCTTCCACAGGTGCGATCATTTCTAGAGGAAAACCTTTCGGAAACTCAATTGATAATGACGCCACAGATCTGGAAAATTCTTTGAAACACGGACaagtcaaatattattttagttctttaaaagtaggttttagaaaatgttaaaagtagAAGATGCAAACGTTCATCGGATTTCCAAAGTGAAGGTGTTTCATAAATCGTGCCCTCTAGACAGGATATCATCGTATACTGTAAGTTCATTATTGAGACACTACAGTATAGATGATGTACTATCAAGGGGGTCAATACGCTTCCAACTGTTTCCGGTGGACCCCGCAAAACATTGAGACAAGAGAGTGGCGGTGAAACCGTTACCATTACTGAGTTTAGTAATGGTAAGGGTTCTGTTGCCTTCTCTCAAAAATCTTCTGGATATGATGGAACTTCAGAGCAACGGATAAAGAGGTCAAAATCAGATGAGGGAAGGAATGGACAAAAACCCCGGAAAGGACAACATTAAGAAGATTTAAAATTCTAACTTTATAGcctgtgtgttttaatgagaCTGTCACTGtctatcatttaaataaaaaaaatatcactgaaTTGAAATTGCTTGTTTCATTACTTTTACAGAAAAGACATAGCATATGCGGTTGGTAAAATGCTTTCTTGTGCTTCCAAGACGTGATGAAAATTAATCTTTGAATTAAGTTTAATGAACATACAATTAACTGATGCAGCCAATGGGATAAAGTTAATAGTCCGTATTAGGATATAGAGAAAGAACCGGG

Function


GO:

id name namespace
GO:0035379 carbon dioxide transmembrane transporter activity molecular_function

KEGG:

id description
ko04640 Hematopoietic cell lineage

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU54680 lncRNA downstream 4535 15742740 ~ 15808380 (-) False fam222ba
TU54690 lncRNA downstream 29910 15777713 ~ 15783005 (-) True G37079
TU54682 lncRNA downstream 57523 15743714 ~ 15755392 (-) False fam222ba
TU54683 lncRNA downstream 57523 15753971 ~ 15755392 (-) False fam222ba
TU54684 lncRNA downstream 60925 15750192 ~ 15751990 (-) False fam222ba
TU54694 lncRNA upstream 26393 15840326 ~ 15841630 (-) True cxcl11.4
TU54651 lncRNA upstream 43307 15857240 ~ 15859084 (-) False cxcl20
TU54657 lncRNA upstream 47144 15861077 ~ 15865160 (-) True G37058
TU54727 lncRNA upstream 80751 15894684 ~ 15978740 (-) True G37092
TU54728 lncRNA upstream 92350 15906283 ~ 15910873 (-) False G37093
XM_043238745.1 mRNA downstream 4596 15757208 ~ 15808319 (-) False fam222ba
XM_043238744.1 mRNA downstream 12327 15757208 ~ 15800588 (-) False fam222ba
XM_043238743.1 mRNA downstream 13777 15757208 ~ 15799138 (-) True fam222ba
XM_043238308.1 mRNA downstream 84909 15726844 ~ 15728006 (-) False emc6
XM_043240512.1 mRNA downstream 103485 15703533 ~ 15709430 (-) False cenpv
XM_043238897.1 mRNA upstream 7936 15821869 ~ 15838717 (-) True flot2a
XM_043238896.1 mRNA upstream 7936 15821869 ~ 15838716 (-) False flot2a
XM_043238539.1 mRNA upstream 26684 15840617 ~ 15841678 (-) False cxcl11.4
XM_043240108.1 mRNA upstream 29060 15842993 ~ 15843844 (-) True LOC122345699
XM_043240103.1 mRNA upstream 32273 15846206 ~ 15847033 (-) False LOC122345695
TU54668 other downstream 84807 15726855 ~ 15728108 (-) False emc6
TU54667 other downstream 85005 15725027 ~ 15727910 (-) True emc6
TU54666 other downstream 85005 15726782 ~ 15727910 (-) False emc6
TU54665 other downstream 85005 15726855 ~ 15727910 (-) False emc6
TU54499 other downstream 103527 15703752 ~ 15709388 (-) True cenpv
TU54705 other upstream 32103 15846036 ~ 15847036 (-) True LOC122345695
TU54710 other upstream 41001 15854934 ~ 15855808 (-) True cxcl11.1
TU54865 other upstream 440216 16254149 ~ 16256739 (-) False LOC122344710
TU54936 other upstream 562575 16376508 ~ 16378495 (-) False LOC122344728
TU54976 other upstream 782922 16596855 ~ 16633121 (-) True G37258

Expression Profile