RNA id: TU54935



Basic Information


Item Value
RNA id TU54935
length 237
lncRNA type sense_over
GC content 0.44
exon number 3
gene id G37239
representative False

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 16389924 ~ 16482086 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GAATTCCCCTCAGATTTTTCTACGAAGAAGAGGAAACGTACATTTACAGAAGACATAGCAGCGTTTACAAGCTTTTCTAAAAGatgcagATCTTTGTCAAAACACTCACTGGTAAGACCATCACCCTTGAAGTCGAGCCAAGTGACACCATTGAGAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAGCAGAGGTTGATCTTTGCTGGCAAACAGCTGGAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU54885 lncRNA downstream 57847 16330931 ~ 16332077 (-) True G37212
TU54726 lncRNA downstream 411184 15950331 ~ 15978740 (-) False G37092
TU54738 lncRNA downstream 451088 15938120 ~ 15938836 (-) True G37098
TU54730 lncRNA downstream 479051 15906283 ~ 15910873 (-) False G37093
TU54958 lncRNA upstream 16319 16474708 ~ 16485114 (-) True G37249
TU54966 lncRNA upstream 19430 16477819 ~ 16554560 (-) True G37255
TU54953 lncRNA upstream 34974 16493363 ~ 16494405 (-) True G37248
TU54984 lncRNA upstream 213363 16671752 ~ 16672934 (-) True G37266
TU55004 lncRNA upstream 242872 16701261 ~ 16704191 (-) True G37281
XM_043238278.1 mRNA downstream 11409 16376266 ~ 16378515 (-) True LOC122344728
XM_043238258.1 mRNA downstream 132932 16253952 ~ 16256992 (-) True LOC122344710
XM_043239219.1 mRNA downstream 251763 16115390 ~ 16138161 (-) False si:ch211-204c21.1
XM_043240100.1 mRNA upstream 329420 16787809 ~ 16789122 (-) False LOC122345693
XM_043238522.1 mRNA upstream 800077 17258466 ~ 17259947 (-) True LOC122344899
XM_043239185.1 mRNA upstream 857992 17316381 ~ 17321058 (-) True LOC122345238
XM_043238288.1 mRNA upstream 870807 17329196 ~ 17345615 (-) True LOC122344736
XM_043238290.1 mRNA upstream 888902 17347291 ~ 17350380 (-) False LOC122344738
TU54936 other downstream 11429 16376508 ~ 16378495 (-) False LOC122344728
TU54865 other downstream 133185 16254149 ~ 16256739 (-) False LOC122344710
TU54710 other downstream 534116 15854934 ~ 15855808 (-) True cxcl11.1
TU54705 other downstream 542888 15846036 ~ 15847036 (-) True LOC122345695
TU54668 other downstream 661816 15726855 ~ 15728108 (-) False emc6
TU54976 other upstream 138466 16596855 ~ 16633121 (-) True G37258
TU54999 other upstream 228871 16687260 ~ 16713167 (-) True G37277
TU54996 other upstream 229026 16687415 ~ 16713167 (-) False G37277
XR_006251078.1 other upstream 3408997 19867386 ~ 19935576 (-) False kcnt1b
XR_006251077.1 other upstream 3408997 19867386 ~ 19935576 (-) False kcnt1b

Expression Profile