RNA id: XM_043240054.1


Basic Information

Item Value
RNA id XM_043240054.1
length 3538
RNA type mRNA
GC content 0.37
exon number 9
gene id mtx3
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 19175463 ~ 19183978 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

atttctgtattttaccaAACATTTGCTGCGTGCAACTCTCTGCTGGCTCTCTCGCTGGGATGCTGGACCCGTCCGTCTCCGTCGCTCACACCAACATGGCGGAACCCATGGAGCTGCTCTGCTGGGGAGGCGACTGGGATCTGCCCTCCGTGCACACAGACTCTCTCGTCGTGCTGGCGTATGCAAAATTTTCAGGTGCAAAGCTTGCAGTAAAATCTATTGACTGGACATGGAGGACTATCACAGCGTCTGTGCCACAGATACACTACGAGGGATCCACGGTCACGGAACCAACACAAATTCTAAACTTCCTACGAAAACAGAGATTCAATGCCGATTATGAGTTGACGGCCAAGCAAGGAGCAGATACAATGGCTTATATCGCCCTCCTGGAGGAAAAGCTGCGGCCAGCACTGCTGCACACATTCTGGGTGGACGCTGAGAACTACGCTAACCTGACCCGACCCTGGTTTACGTCACATTCCCCGTTCCCCCTTAACTTCTTTGTACCGGGTCGACAGGCCAGCTTGGCCCTGTCCCGCATCCTACTGACCAAAGCAGAGTCGCCGTTGCTGAACATCACAGAGGTAGAGGGAAAGATCTACAGCGAAGCCAAAGAGTGCCTGAATTTGCTCTCCCACAGACTTGGGAACTTCCATTTCTTCTTTGGAGACACGCCTACAAGCCTGGACGCCTTTGTGTTTGGCCACATCGCCCCTCTAATTAAAGCCCCTCTGCCCAGTGGACAGCTTCAGAAGCACCTGAACCAACTTGATAACCTCTGCCAGTTCTGCAACACCATCCTTAAAAACTACTTTTCCGATGCCTCTGCTGAGAAGAGAATGGACTGCTCACAGATGACTACCCACGATCCTGTCGATGCAAACCTCCAGAAACTGACACAACTTGTTAACAAAGAGTCCAACCTTATCGAAAAGATGGATGACAATCTTCGCAGCAGTCCCCAGCACAGACCGCACAGACACGAGACCAAACCCTCGTCCTTGGCCGGCCAGAGCAACTCCACCCCTCCCTGATTAAACCCTTCTATCCAagcactgaatcattcatttattttccatggTAATGGAAATCGACGTATTGTCAcatgatatttatattataacataCTTATGCAGTTAACACTAGCTTTTCATGATGAAGTTGTCGAAATGTCTCACTCAGTACAACAACATCAAGGGCTTTTTAAATGGGCATTCttcatctgttttatttaaaaaaatctttagcaCATACGCCAACTAcatataaaaaggaaaatgcttTTTAGTAGCCGAAACATTGATATGACTTAAGATACAAATGCTATAAAGAGAAGCGAGTTGCATTTTGCATCTTTGgcttttcagaaatcattgtaaatgAAACTTTAAATTCACTAGCTGGCTTTCCAAATGCAGaaggttttgtgtgttttatgacgtttctatttatttgatcaatccTGCCCTAGCACAATTACAGGTACATTAAAAGCTTTCTGGTTTATATACTAGGTGTTCAGCTTTTATTCCATGGTTCCATCATAGAGTCGTTTATAATTCGATCTTTCCGTTGATGTGTAGCTTTCCACTTTCTTGACTTTTGGTGCAAAGGGATCTTGACatctgtgtactgtgtatacaTTAACTGTTCTTCATATTCTTCTGGAGGTTTTATACATGCGAGGAATGCCTTAAAAGTCTAGTGCCACGTCACGCCATCACACCcgactgtatttttaatgtaatgggTCATGCATTGTTTCaagaaaaattgtatatttcacaatatatcaatgtataaaatatatgtacatatatgcaATAAAGTGAAGCTCTTTGAAACTTTTCTCAGATAAATGTGGAAGAAAACAAGCTAACATGttttaacttattatttttattctttatgtatttttagttgCTTACGCCAAAGGGAAAactgctacatttttttatttgtacagtggAAAGTATTGTAGATAAATCCTGACAATTTATTTGTCTCTCTGAATGAACAATACTAACATATTGCACAACtttccattcattcatcatttaaaTGTGGCAGTAAGAGAGAGTCAGCTATAGGACAGCTGTTTGGATGTCACATGGAAGCTATTACAACTCACCGCTCCCCAAATATTCACATTCACCCTCAACAAAATGGAAAGGACAGgacttttttttcatcctttgttttgctggttACCCCACCCCCACCCACCATCTatgattaattacaatattattattaatagtaatattatggCTAAAAAGAAGAATGTTTAATAACACCCACCGATAAATAatttagggtcagtaagattttataaaaatgtatttgtaataaaaagaaagtaaacatttaaatgtaaaaatcactaCACAAATGCCtttcaaaaaatgcttttatccacCTCGGACTCctgaaaaaaattgttcaaactTTTGCAGCACAACTGTCTATAACATTAGTGAACATTGAATTAGTAtcatattagtatgatttcacGTAATCGTGTGAGACTGGAGTAAGGGCTGCTGGGAATTCAGATTTGAATCATaggaataaagtacattttaaaaatacattaatgttacattAAAGCAATTGTAAATTGCcataataatttatgaaataataaaataacattaaatattcattatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaacctgagcctaaacatttaaaatctaactgaccccaaactttttaaaatctgaattcaTCTGTCAGCTTAATTCTTTATTAAATCCTCTCTGATAGTAAAACATCTTACTGACactaaaaatattcagaagcattgttaacattttaattcagtcCAGTTGTTTccagaaatacaaataaatatacaagtaGACTAATTCATATCACTACTAAATAATTAGACAACAGAAACacttaaaagaataattttacaaaacagaCACCAAACAACTTGAAAATTAAGCGCCATCCATACAGTATGTTGGCATTAGAcaataaatagaatttaaatgtaatttttaacgGATTTTGACGATCATACAGTGAACGATCTGATACAGTGGTGATCCACTGGAAGAGAAAACTCAAATCTGAACTAAAAAGTTTTTGATTAAGTGAGATCCAGGCcaccaaaaattttaaatggaaacaGTGAAATAACCTTTTCCTACCAAATCATGTAAATACACTAAaccacagaaaaataaatattttcatcacTCATTTGTGATGCCTTGCCCATCATCTCGAAAAAACACGTGTCTCCGTTTAGCTATGTAAGCATTATTATCAGTGCCAGCGTCTGTTTTATTCAAACAACCTGGAAGCCTGCAgcttccaaaataaataaactgcctCTGAACGTGAATGTCAGCACATCATGTGATCCAGGAGATCGTCACATACTGTACGATAAGAAACAAAACTGGTCGCATGCACTTTCTGTTTCATATATACAAGAACAGCGCAACAGCTc

Function

GO:

id name namespace
GO:0006626 protein targeting to mitochondrion biological_process
GO:0005741 mitochondrial outer membrane cellular_component

KEGG:

id description
K17776 MTX; metaxin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU55717 lncRNA downstream 43088 19132813 ~ 19133144 (-) True G37776
TU55715 lncRNA downstream 52924 19123025 ~ 19123308 (-) True G37774
TU55695 lncRNA downstream 100458 19068914 ~ 19075774 (-) False G37757
TU55692 lncRNA downstream 100458 19070502 ~ 19075774 (-) True G37757
TU55526 lncRNA downstream 362461 18813564 ~ 18813771 (-) True G37637
TU55741 lncRNA upstream 40375 19224352 ~ 19225429 (-) True G37792
TU55750 lncRNA upstream 97888 19281865 ~ 19282092 (-) True G37799
TU55751 lncRNA upstream 98400 19282377 ~ 19282691 (-) True G37800
TU55752 lncRNA upstream 102650 19286627 ~ 19286848 (-) True G37801
TU55882 lncRNA upstream 321944 19505921 ~ 19510282 (-) True G37877
XM_043240714.1 mRNA downstream 19714 19134372 ~ 19156518 (-) True homer1b
XM_043240713.1 mRNA downstream 25056 19134372 ~ 19151176 (-) False homer1b
XM_043240461.1 mRNA downstream 44900 19124324 ~ 19131332 (-) True lhfpl2b
XM_043238716.1 mRNA downstream 93154 19079743 ~ 19083078 (-) False otpb
XM_043238715.1 mRNA downstream 93163 19079743 ~ 19083069 (-) True otpb
XM_043240053.1 mRNA upstream 12041 19196018 ~ 19216739 (-) True serinc5
XM_043238313.1 mRNA upstream 33758 19217735 ~ 19221166 (-) True cdk7
XM_043239112.1 mRNA upstream 113322 19297299 ~ 19313145 (-) False LOC122345207
XM_043239111.1 mRNA upstream 113322 19297299 ~ 19313144 (-) False LOC122345207
XM_043239113.1 mRNA upstream 113322 19297299 ~ 19312531 (-) True LOC122345207
TU54999 other downstream 2463065 16687260 ~ 16713167 (-) True G37277
TU54996 other downstream 2463065 16687415 ~ 16713167 (-) False G37277
TU54976 other downstream 2543111 16596855 ~ 16633121 (-) True G37258
TU54936 other downstream 2797737 16376508 ~ 16378495 (-) False LOC122344728
TU54865 other downstream 2919493 16254149 ~ 16256739 (-) False LOC122344710
XR_006251078.1 other upstream 683409 19867386 ~ 19935576 (-) False kcnt1b
XR_006251077.1 other upstream 683409 19867386 ~ 19935576 (-) False kcnt1b
XR_006251079.1 other upstream 684837 19868814 ~ 19935576 (-) False kcnt1b
TU56161 other upstream 867682 20051659 ~ 20055798 (-) True G38058
TU56325 other upstream 941612 20125589 ~ 20127390 (-) True G38140

Expression Profile