Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU59004 |
| length | 373 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G39857 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056703.1 |
| NCBI id | CM032072.1 |
| chromosome length | 32833783 |
| location | 27188850 ~ 27189222 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006250928.1 | lncRNA | downstream | 41888 | 27115967 ~ 27146962 (-) | True | LOC122344810 |
| XR_006250929.1 | lncRNA | downstream | 41888 | 27129247 ~ 27146962 (-) | False | LOC122344810 |
| TU58817 | lncRNA | downstream | 46192 | 27140795 ~ 27142658 (-) | False | LOC122344808 |
| XR_006250926.1 | lncRNA | downstream | 46250 | 27140415 ~ 27142600 (-) | True | LOC122344808 |
| XR_006250927.1 | lncRNA | downstream | 60394 | 27127129 ~ 27128456 (-) | True | LOC122344809 |
| TU59020 | lncRNA | upstream | 35665 | 27224887 ~ 27225562 (-) | True | G39870 |
| TU59023 | lncRNA | upstream | 43436 | 27232658 ~ 27234162 (-) | True | G39872 |
| TU59040 | lncRNA | upstream | 76067 | 27265289 ~ 27267229 (-) | True | G39888 |
| TU59046 | lncRNA | upstream | 95960 | 27285182 ~ 27286194 (-) | True | G39893 |
| TU59120 | lncRNA | upstream | 349266 | 27538488 ~ 27538861 (-) | True | G39935 |
| XM_043238359.1 | mRNA | downstream | 15956 | 27168265 ~ 27172894 (-) | True | LOC122344788 |
| XM_043239545.1 | mRNA | downstream | 81471 | 27099855 ~ 27107379 (-) | False | LOC122345426 |
| XM_043239544.1 | mRNA | downstream | 81473 | 27099855 ~ 27107377 (-) | False | LOC122345426 |
| XM_043239542.1 | mRNA | downstream | 89131 | 27095380 ~ 27099719 (-) | True | LOC122345424 |
| XM_043239546.1 | mRNA | downstream | 174352 | 27001647 ~ 27014498 (-) | True | LOC122345427 |
| XM_043238698.1 | mRNA | upstream | 87825 | 27277047 ~ 27280391 (-) | True | spaw |
| XM_043238696.1 | mRNA | upstream | 98950 | 27288172 ~ 27293486 (-) | True | usp39 |
| XM_043238697.1 | mRNA | upstream | 113037 | 27302259 ~ 27308208 (-) | True | mat2ab |
| XM_043239463.1 | mRNA | upstream | 123667 | 27312889 ~ 27334798 (-) | True | inpp5jb |
| XM_043238855.1 | mRNA | upstream | 154268 | 27343490 ~ 27389998 (-) | True | smtnb |
| unassigned_transcript_1081 | other | downstream | 1077448 | 26111332 ~ 26111402 (-) | True | trnag-gcc_64 |
| unassigned_transcript_1080 | other | downstream | 1079280 | 26109500 ~ 26109570 (-) | True | trnag-gcc_63 |
| unassigned_transcript_1079 | other | downstream | 1087441 | 26101339 ~ 26101409 (-) | True | trnag-gcc_62 |
| unassigned_transcript_1078 | other | downstream | 1096854 | 26091926 ~ 26091996 (-) | True | trnag-gcc_61 |
| unassigned_transcript_1077 | other | downstream | 1099062 | 26089718 ~ 26089788 (-) | True | trnag-gcc_60 |
| TU59072 | other | upstream | 193699 | 27382921 ~ 27398720 (-) | True | isca1 |
| TU59237 | other | upstream | 699901 | 27889123 ~ 27895454 (-) | True | LOC122344874 |
| TU59335 | other | upstream | 1066606 | 28255828 ~ 28264704 (-) | True | G40080 |
| TU59455 | other | upstream | 2271363 | 29460585 ~ 29490204 (-) | True | G40182 |
| XR_006251000.1 | other | upstream | 2427777 | 29616999 ~ 29655061 (-) | False | eng |
