RNA id: TU59650



Basic Information


Item Value
RNA id TU59650
length 449
RNA type TUCP
GC content 0.53
exon number 1
gene id LOC122344966
representative False

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 29924702 ~ 29928675 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCTTCAGATTCATCAACTCATCTCTGCTTCTGAGCCAGCGACCTCTGAACACCTCTGCAGCTGAGCAGACGGTGTACAGCAGCTGTGCAGACATGCCCGCCGTGCTCATCTTCTACCTGCTGCTACAGTTCATCAACATGTTCCTGGGCATCCCTGCCAACATCATGGTTCTGTGGCTCATTCGTAAGAACAAGGGCGACTCGTCCAGCTCAGACATCTTCATCGTGCACCTTGCTGTGCTGGATGCGTTCTTCTGCCTCATTCCTCCGCTGGAGCTGGCCAACATCGTCTACCTGAGCTCCAGCAAAACCTGGTATGTCTTGCGCTTCTTCTACGGTGTCAAAGACTCGTCTCCACTCTTTCTGTCCTGCATCTGTCTGGACAGATACATGGCCGTGCTGCATCCCATCACCTTCACAGAGCTTAAGGACAAGCAGCATCGTTCCATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU59589 lncRNA downstream 120583 29801194 ~ 29805802 (-) False G40268
TU59596 lncRNA downstream 120583 29801194 ~ 29805802 (-) True G40268
TU59587 lncRNA downstream 240658 29685128 ~ 29685727 (-) True G40266
TU59585 lncRNA downstream 279372 29646617 ~ 29647013 (-) True G40264
TU59464 lncRNA downstream 601311 29323982 ~ 29325074 (-) True LOC122345120
XR_006250938.1 lncRNA upstream 112621 30039454 ~ 30046148 (-) True LOC122344857
TU59775 lncRNA upstream 115807 30042640 ~ 30042867 (-) False LOC122344857
TU59777 lncRNA upstream 126779 30053612 ~ 30054797 (-) True LOC122345788
XR_006251033.1 lncRNA upstream 126796 30053629 ~ 30054797 (-) False LOC122345788
TU59797 lncRNA upstream 179009 30105842 ~ 30106738 (-) True G40422
XM_043238632.1 mRNA downstream 6890 29910912 ~ 29919495 (-) True LOC122344958
XM_043238807.1 mRNA downstream 46282 29859552 ~ 29880103 (-) True prrc2b
XM_043238808.1 mRNA downstream 46282 29861277 ~ 29880103 (-) False prrc2b
XM_043239186.1 mRNA downstream 79395 29838639 ~ 29846990 (-) True fam78ab
XM_043238496.1 mRNA downstream 227759 29673233 ~ 29698626 (-) True gpsm1b
XM_043238641.1 mRNA upstream 1990 29928823 ~ 29943177 (-) False sapcd2
XM_043238640.1 mRNA upstream 1990 29928823 ~ 29943177 (-) True sapcd2
XM_043238642.1 mRNA upstream 3841 29930674 ~ 29943177 (-) False sapcd2
XM_043238643.1 mRNA upstream 40574 29967407 ~ 29970909 (-) False LOC122344964
XM_043238644.1 mRNA upstream 40574 29967407 ~ 29970825 (-) True LOC122344964
XR_006251000.1 other downstream 271324 29616999 ~ 29655061 (-) False eng
TU59455 other downstream 436181 29460585 ~ 29490204 (-) True G40182
TU59335 other downstream 1661681 28255828 ~ 28264704 (-) True G40080
TU59237 other downstream 2030931 27889123 ~ 27895454 (-) True LOC122344874
TU59072 other downstream 2527665 27382921 ~ 27398720 (-) True isca1
TU59790 other upstream 165116 30091949 ~ 30093513 (-) False rnf170
TU59791 other upstream 165116 30091949 ~ 30093513 (-) False rnf170
TU60232 other upstream 674068 30600901 ~ 30603493 (-) False fubp3
TU60233 other upstream 678011 30604844 ~ 30613141 (-) False fubp3
TU60256 other upstream 704195 30631028 ~ 30696688 (-) False G40711

Expression Profile