RNA id: TU60330


Basic Information

Item Value
RNA id TU60330
length 933
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G40751
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30821125 ~ 30846878 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ctttattttgcaATTGTGGTAGAAAGGTCTTCTACAGTTTCCAGATTTCAATAAATAACTTTGAGCATGTGACATGACGTTTATCCAGTAACCCCTGACCCGGAGCACCCTCCCGCTCATCGCCCCTCACAGAACTGCCTGACAACAGCAGCATCGAGCCTCAAACCAGGCTGACAAAATCTCCACCGGAGtgaagagaaaataagacaaCAAACGCAACTCTCTAACGCTTCTCATAAAGTCTTTTCCGAGATTGGATGCTTTACGTTCGCCCATCTTGTACAAAAATGTCCGTCGTGTTCAATATGTACACCTAGAGAGGCGAGGGCATCAACGCGACTGAAAACAGTGTCCAGACGATCTACAACTCGTCCTTGTCGCCCTGATCTTCGCCCTCCTCCGGCGGCGGGCCACCTGCGCTGCCGTACAGCTTGCTTACGATGGGCTGCACGACTTCCTCCAGCTCCTTCTTCTTGGCCTGGAAGTCCTCGAGATCTGCGTCCTGGTGAGACTCCAGCCACTCGATCTTCTCCTCGACGGCCTTCTCGATGGCCTCCTTGTCTTCAGAAGACAGCTTGCCGCCCAGCTTCTCTTTGTCTCCAATCTGGTTCTTCAGGGAGTAAGCGTAGCTCTCCAGCTCGTTGCGGGCGTCGATGCGCTCCTTCAGCTTCTTGTCCTCGTCGGCGAAGCGCTCTGCCTCGTTCACCATGCGCTCGATGTCCTCAGGTGTCAGGCGGTTCTGGTCGTTGGTGATGGTGATCTTGTTCTTGTTGCCCGTGCCCTTGTCTTCAGCGGTGACTCTCAAGATGCCGTTGACATCAATCTCGAAGGTGACCTCGATCTGAGGAACGCCACGGGGAGCCGGAGGGATGCCGGTCAGGTCAAAGGTGCCCAGGAGGTGGTTATCTTTAGTCAGTGGACGCTCACCTGGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60299 lncRNA downstream 49101 30770714 ~ 30772024 (-) True G40739
TU60254 lncRNA downstream 89887 30679158 ~ 30731238 (-) True G40711
TU60356 lncRNA upstream 37929 30866243 ~ 30919510 (-) True G40762
TU60357 lncRNA upstream 60026 30888340 ~ 30919600 (-) False G40762
TU60350 lncRNA upstream 92537 30920851 ~ 30925197 (-) False G40760
TU60352 lncRNA upstream 92537 30920851 ~ 30925197 (-) True G40760
XR_006250920.1 lncRNA upstream 92864 30921178 ~ 30925197 (-) True LOC122344700
XM_043238534.1 mRNA downstream 51218 30765631 ~ 30769907 (-) True LOC122344907
XM_043240568.1 mRNA downstream 66185 30734104 ~ 30754940 (-) False golga2
XM_043238521.1 mRNA upstream 2875 30831189 ~ 30835734 (-) True rabepk
XM_043238238.1 mRNA upstream 92503 30920817 ~ 30941882 (-) True LOC122344688
XM_043238243.1 mRNA upstream 114200 30942514 ~ 30951488 (-) True cux2a
XM_043238956.1 mRNA upstream 150279 30978593 ~ 31052589 (-) True mcc
XM_043238245.1 mRNA upstream 225610 31053924 ~ 31064355 (-) True rcl1
TU60266 other downstream 28406 30789633 ~ 30792719 (-) True G40713
TU60256 other downstream 124437 30631028 ~ 30696688 (-) False G40711
TU60253 other downstream 124437 30650941 ~ 30696688 (-) False G40711
TU60233 other downstream 207984 30604844 ~ 30613141 (-) False fubp3
TU60232 other downstream 217632 30600901 ~ 30603493 (-) False fubp3
XR_006251005.1 other upstream 874139 31702453 ~ 31711737 (-) True apooa
TU60769 other upstream 892956 31721270 ~ 31722906 (-) True G41035
XR_006251008.1 other upstream 1293970 32122284 ~ 32173823 (-) False tnca
XR_006251085.1 other upstream 1385962 32214276 ~ 32293782 (-) False LOC122346090
XR_006251086.1 other upstream 1385978 32214292 ~ 32293782 (-) False LOC122346090