RNA id: TU60357


Basic Information

Item Value
RNA id TU60357
length 407
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G40762
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30866243 ~ 30919600 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGATTTCTTGAACAGAGCTCCACATCCGGTTTCACCTGAAAGGAAGTCCAGAAAAACGCCGAGACGCAGAAGCTCAGATAAAGATAAACTTTAGTTTATTAGTGGCTATAGATAATGCTATCAGAccataatcataaaaaatgagGAAACAAGAAACGCTACATCTCTGGTTAAACATCAGCGTGGATTAGCGAAGTGCGTCAGGATACAGGAACAGAAACGAGAAGCAGGAACAGAACGAAGCCGTCACAGCGTCTCCATGCGGCGGAACGAGACGAGACGATCGCTGCGGCACACGGCACTTCAGTCCAGAGAGAAACCCGAGCCATTCCTTTAGGACCCTGAGTTCATCATTCAGAGAAGCGGACGATACTGCGGTGAAGAGAACACTAGCGCCGTGGGCTTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60333 lncRNA downstream 41462 30821125 ~ 30846878 (-) True G40751
TU60329 lncRNA downstream 60026 30821125 ~ 30828314 (-) False G40751
TU60330 lncRNA downstream 60026 30821125 ~ 30828314 (-) False G40751
TU60332 lncRNA downstream 60026 30821125 ~ 30828314 (-) False G40751
TU60336 lncRNA downstream 63044 30817732 ~ 30825296 (-) False G40752
TU60350 lncRNA upstream 1251 30920851 ~ 30925197 (-) False G40760
TU60352 lncRNA upstream 1251 30920851 ~ 30925197 (-) True G40760
XR_006250920.1 lncRNA upstream 1578 30921178 ~ 30925197 (-) True LOC122344700
XR_006250921.1 lncRNA upstream 39844 30959444 ~ 30963507 (-) True LOC122344701
XR_006250922.1 lncRNA upstream 54718 30974318 ~ 30974883 (-) True LOC122344702
XM_043238521.1 mRNA downstream 52606 30831189 ~ 30835734 (-) True rabepk
XM_043238534.1 mRNA downstream 118433 30765631 ~ 30769907 (-) True LOC122344907
XM_043240566.1 mRNA downstream 133400 30734104 ~ 30754940 (-) False golga2
XM_043238238.1 mRNA upstream 1217 30920817 ~ 30941882 (-) True LOC122344688
XM_043238243.1 mRNA upstream 22914 30942514 ~ 30951488 (-) True cux2a
XM_043238956.1 mRNA upstream 58993 30978593 ~ 31052589 (-) True mcc
XM_043238245.1 mRNA upstream 134324 31053924 ~ 31064355 (-) True rcl1
XM_043238241.1 mRNA upstream 154443 31074043 ~ 31081265 (-) True LOC122344691
TU60335 other downstream 61982 30819515 ~ 30826358 (-) True G40752
TU60340 other downstream 61982 30819515 ~ 30826358 (-) False G40752
TU60266 other downstream 95621 30789633 ~ 30792719 (-) True G40713
TU60256 other downstream 191652 30631028 ~ 30696688 (-) False G40711
XR_006251005.1 other upstream 782853 31702453 ~ 31711737 (-) True apooa
TU60769 other upstream 801670 31721270 ~ 31722906 (-) True G41035
XR_006251008.1 other upstream 1202684 32122284 ~ 32173823 (-) False tnca
XR_006251085.1 other upstream 1294676 32214276 ~ 32293782 (-) False LOC122346090
XR_006251086.1 other upstream 1294692 32214292 ~ 32293782 (-) False LOC122346090

Expression Profile