RNA id: TU60737



Basic Information


Item Value
RNA id TU60737
length 292
lncRNA type inter_gene
GC content 0.53
exon number 2
gene id G41019
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31683968 ~ 31684836 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTAAACTCGCCATTGATCACAGCTGTTCCTTCCCAGTGTGGTGCTGGTTTTgaaactTTTGGCTTTGCTCAGGTGCAAGGAATGATCAGAGACGGGGACGCGGAAAGCCTCTCCGGGATAAACGTGTCCTCCGGCGTAATTGTAACACTCCCGCTCCTTCTTCAAGTCCGCACCGTCACACAAAACCGACTCGGTGAGTAAAAGAAGCGTGCAAACCACGCCGAGCCACTCTCTGGGCGTTTTAACGCAGCGACTGACATCCATTGCTGAGTCTTGCAGGAAGCACGTCTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU60767 lncRNA downstream 35356 31646858 ~ 31648612 (-) True G41034
XR_006251025.1 lncRNA downstream 185874 31456500 ~ 31498094 (-) True LOC122345708
XR_006251024.1 lncRNA downstream 185874 31461934 ~ 31498094 (-) False LOC122345708
XR_006251026.1 lncRNA downstream 185874 31477391 ~ 31498094 (-) False LOC122345708
TU60685 lncRNA downstream 188699 31435649 ~ 31495269 (-) True G40996
TU60730 lncRNA upstream 7030 31691866 ~ 31695788 (-) False G41018
TU60732 lncRNA upstream 7030 31691866 ~ 31695788 (-) True G41018
TU60733 lncRNA upstream 7030 31691866 ~ 31695788 (-) False G41018
TU60772 lncRNA upstream 27515 31712351 ~ 31732259 (-) True G41037
TU60785 lncRNA upstream 38906 31723742 ~ 31904787 (-) True G41047
XM_043239012.1 mRNA downstream 388 31674315 ~ 31683580 (-) False srrt
XM_043239011.1 mRNA downstream 388 31674315 ~ 31683580 (-) False srrt
XM_043239010.1 mRNA downstream 388 31674315 ~ 31683580 (-) False srrt
XM_043239009.1 mRNA downstream 388 31674315 ~ 31683580 (-) True srrt
XM_043238917.1 mRNA downstream 12360 31668017 ~ 31671608 (-) True LOC122345089
XM_043239558.1 mRNA upstream 17617 31702453 ~ 31711737 (-) False apooa
XM_043239559.1 mRNA upstream 17617 31702453 ~ 31711734 (-) False apooa
XM_043238572.1 mRNA upstream 48622 31733458 ~ 31735951 (-) True zgc:153704
XM_043239997.1 mRNA upstream 75100 31759936 ~ 31857602 (-) True LOC122345662
XM_043238392.1 mRNA upstream 175060 31859896 ~ 31864890 (-) True zbtb43
TU60335 other downstream 857610 30819515 ~ 30826358 (-) True G40752
TU60340 other downstream 857610 30819515 ~ 30826358 (-) False G40752
TU60266 other downstream 891249 30789633 ~ 30792719 (-) True G40713
TU60256 other downstream 987280 30631028 ~ 30696688 (-) False G40711
XR_006251005.1 other upstream 17617 31702453 ~ 31711737 (-) True apooa
TU60769 other upstream 36434 31721270 ~ 31722906 (-) True G41035
XR_006251008.1 other upstream 437448 32122284 ~ 32173823 (-) False tnca
XR_006251085.1 other upstream 529440 32214276 ~ 32293782 (-) False LOC122346090
XR_006251086.1 other upstream 529456 32214292 ~ 32293782 (-) False LOC122346090

Expression Profile