RNA id: TU60793



Basic Information


Item Value
RNA id TU60793
length 466
lncRNA type intronic
GC content 0.48
exon number 2
gene id G41051
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31797709 ~ 31798268 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGGGATAGTGCGCTGATGTTCCcgcttctttctctctttctgtttgctTTATCCTTTTAATCTCTCTCCAGGCAGGTTGGATGCTGTCGTCCCTGAAGTGAAAGTCATCACAGTTCCACCACTGTCCTTTCTGGGCTTATTCTGTCCCTCTCTCTTGTTGTCCGTCCCCCGGCGTGTGTCCTGTCATAGGATGATGGGTGACTGTCTCATTTTGTGTCCTAGTGTAAATTGCTCTTTAAGTTGACTGGTGTCTGCATGTCCTGCTGGAGTCTCTGTCCAAATGATCCTGCGGCTGCTCGCTGTTAAATGTTCACTTTGAGTGACACATTGATTTAGAGAGACGTCCTTAACTTCCACTAATCACTACTGAACAAAGGGAACGCtctgctgtgtttttctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctctctctctctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU60772 lncRNA downstream 65450 31712351 ~ 31732259 (-) True G41037
TU60771 lncRNA downstream 65450 31730532 ~ 31732259 (-) False G41037
TU60752 lncRNA downstream 95891 31655583 ~ 31701818 (-) True G41023
TU60730 lncRNA downstream 101921 31691866 ~ 31695788 (-) False G41018
TU60732 lncRNA downstream 101921 31691866 ~ 31695788 (-) True G41018
TU60811 lncRNA upstream 177668 31975936 ~ 31977051 (-) True G41064
TU60812 lncRNA upstream 179446 31977714 ~ 31978466 (-) True G41065
TU60963 lncRNA upstream 587859 32386127 ~ 32386472 (-) True G41177
TU60989 lncRNA upstream 640351 32438619 ~ 32439145 (-) True G41198
TU60982 lncRNA upstream 646014 32444282 ~ 32445281 (-) True G41191
XM_043238572.1 mRNA downstream 61758 31733458 ~ 31735951 (-) True zgc:153704
XM_043239558.1 mRNA downstream 85972 31702453 ~ 31711737 (-) False apooa
XM_043239559.1 mRNA downstream 85975 31702453 ~ 31711734 (-) False apooa
XM_043239012.1 mRNA downstream 114129 31674315 ~ 31683580 (-) False srrt
XM_043238392.1 mRNA upstream 61628 31859896 ~ 31864890 (-) True zbtb43
XM_043239757.1 mRNA upstream 97535 31895803 ~ 31934473 (-) True lmx1ba
XM_043239754.1 mRNA upstream 145587 31943855 ~ 31960848 (-) True mvb12ba
XM_043239755.1 mRNA upstream 145587 31943855 ~ 31960846 (-) False mvb12ba
XM_043239756.1 mRNA upstream 145587 31943855 ~ 31956160 (-) False mvb12ba
TU60769 other downstream 74803 31721270 ~ 31722906 (-) True G41035
XR_006251005.1 other downstream 85972 31702453 ~ 31711737 (-) True apooa
TU60335 other downstream 971351 30819515 ~ 30826358 (-) True G40752
TU60340 other downstream 971351 30819515 ~ 30826358 (-) False G40752
TU60266 other downstream 1004990 30789633 ~ 30792719 (-) True G40713
XR_006251008.1 other upstream 324016 32122284 ~ 32173823 (-) False tnca
XR_006251085.1 other upstream 416008 32214276 ~ 32293782 (-) False LOC122346090
XR_006251086.1 other upstream 416024 32214292 ~ 32293782 (-) False LOC122346090
XR_006251087.1 other upstream 416025 32214293 ~ 32293782 (-) True LOC122346090
XR_006251089.1 other upstream 416027 32214295 ~ 32293782 (-) False LOC122346090

Expression Profile