RNA id: TU60927



Basic Information


Item Value
RNA id TU60927
length 1040
RNA type TUCP
GC content 0.42
exon number 4
gene id LOC122346085
representative False

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 32283537 ~ 32314631 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GACGGCCTGCACAGTTCTCACTGAACCCTGGTGGATTTATTCATCTCTTTCAGCTCTTTTTTTGACCCCTTTTTTCTCCACGCTCTAATATCTGTGTGTTATTGGAGTGTTCGCCTGCCATCATGGCGACGGGCGGCTCGCAGACGAACGCGAAGAGCTCTCTGAACGGGAGCATGGATTTATATCACAGCTGGTTCGGGTCTACAACTCCACGACCTCCTCTAAAAAACTACCTGCTCCTGACCATCCTTACCTGCTTCTGTCCAGCCTACCCTGTCAATATTTTAGCCCTGGTCTTCTCTGTAATGTCCAGAAATAGTTACGATCAGGGAGATTACGAGGGTTCAAGGCGTTTAGGGAAGATGGCGCTCTATGTGTCCATCGCCTCCATCATCATCGGCATCCTCATCATCACCATCTTCTGCGCTGTGCATTTTAGCGCGAAGGATGTGTAAGATGGCAGTGTTTTTGGCGAAGGACATCCACTGGGTCGCTCTGTCTGCTGAGATGTTTGTAATGAAACCGGGATCTGCAGCTCCCTGCTTTTAAAAGAGAGGTGGATGAGTTATGAGAATTTTGCTCGAGTAAATTTTATATACGCACCCGTGCACGTACCGTACtgaacatgtaaataattttgtctttttctaaTTCTTTTTCTGGCTATCCTGTATTGAAATGTACAGCTGCAAACGGATCCGGGGTTAAATCTCAATGCTAAAACGATCAATAATGACCTTGACGCAGTCGCAACGCATCACGCCGCGTCTCGAAAGCTCTTATTCGGTTCTGTAAAAACTACTGGAAATGTAAATATGACTCATTTTTGGTGCTTAACGATTCGCTCTGCCAGTCGATCGTTATAGTAATGAATGGGGTGTTCATATTCATAACTTAAGTGTGTCCGTTTAAATACTGATTCTGTGTATTAGTTAGTCAATTGTAGAGATGTTTTCACGAATTAACTAATAAAGTTCGtttataaagctgaaaaaaaaaaaaaaaaaaaaaaaaaaaaatatatatatatatatatatat

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU60812 lncRNA downstream 305071 31977714 ~ 31978466 (-) True G41065
TU60811 lncRNA downstream 306486 31975936 ~ 31977051 (-) True G41064
TU60785 lncRNA downstream 378750 31723742 ~ 31904787 (-) True G41047
TU60963 lncRNA upstream 71672 32386127 ~ 32386472 (-) True G41177
TU60989 lncRNA upstream 124164 32438619 ~ 32439145 (-) True G41198
TU60982 lncRNA upstream 129827 32444282 ~ 32445281 (-) True G41191
TU61018 lncRNA upstream 162807 32477262 ~ 32477840 (-) True G41216
TU61019 lncRNA upstream 165900 32480355 ~ 32480713 (-) True G41217
XM_043239627.1 mRNA downstream 109473 32113896 ~ 32174064 (-) True tnca
XM_043239628.1 mRNA downstream 110121 32113896 ~ 32173416 (-) False tnca
XM_043239629.1 mRNA downstream 110146 32113896 ~ 32173391 (-) False tnca
XM_043239589.1 mRNA downstream 179751 32082560 ~ 32103786 (-) False rabl6a
XM_043239591.1 mRNA downstream 179751 32082560 ~ 32103786 (-) True rabl6a
XM_043240476.1 mRNA upstream 1232 32315687 ~ 32342744 (-) True LOC122345937
XM_043238594.1 mRNA upstream 101770 32416225 ~ 32421598 (-) True ostf1
XM_043239474.1 mRNA upstream 145003 32459458 ~ 32464623 (-) True LOC122345374
XM_043238262.1 mRNA upstream 323805 32638260 ~ 32681474 (-) False bmpr1ba
XM_043238261.1 mRNA upstream 323805 32638260 ~ 32681474 (-) True bmpr1ba
XR_006251008.1 other downstream 109714 32122284 ~ 32173823 (-) False tnca
TU60769 other downstream 560631 31721270 ~ 31722906 (-) True G41035
XR_006251005.1 other downstream 571800 31702453 ~ 31711737 (-) True apooa
TU60335 other downstream 1457179 30819515 ~ 30826358 (-) True G40752
TU61129 other upstream 429712 32744167 ~ 32745881 (-) False LOC122345737

Expression Profile


TU60927 Expression in all Baseline Samples

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TU60927 Expression in each Bioproject

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TU60927 Expression in each Sample
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