RNA id: XM_043240757.1


Basic Information

Item Value
RNA id XM_043240757.1
length 1169
RNA type mRNA
GC content 0.44
exon number 3
gene id LOC122346085
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 32283537 ~ 32314631 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ataTTTGCCAAATTTCGTTGTGACATGAAAAATCAGAAAATCTCACGAGCTCAAACTTTGCCGTGCTGGAACGCGTCCATGGGAAAGTGTCTCTTCTCCCTGATCCCATTACTCGTGGGTTCTTCTTGCCCAAACACCCTCCTGCCCAAAATACTCCTCATTTCATCTTGTTTCCCGACGGCCTGCACAGTTCTCACTGAACCCTGGTGGATTTATTCATCTCTTTCAGCTCTTTTTTTGACCCCTTTTTTCTCCACGCTCTAATATCTGTGTGTTATTGGAGTGTTCGCCTGCCATCATGGCGACGGGCGGCTCGCAGACGAACGCGAAGAGCTCTCTGAACGGGAGCATGGATTTATATCACAGCTGGTTCGGGTCTACAACTCCACGACCTCCTCTAAAAAACTACCTGCTCCTGACCATCCTTACCTGCTTCTGTCCAGCCTACCCTGTCAATATTTTAGCCCTGGTCTTCTCTGTAATGTCCAGAAATAGTTACGATCAGGGAGATTACGAGGGTTCAAGGCGTTTAGGGAAGATGGCGCTCTATGTGTCCATCGCCTCCATCATCATCGGCATCCTCATCATCACCATCTTCTGCGCTGTGCATTTTAGCGCGAAGGATGTGTAAGATGGCAGTGTTTTTGGCGAAGGACATCCACTGGGTCGCTCTGTCTGCTGAGATGTTTGTAATGAAACCGGGATCTGCAGCTCCCTGCTTTTAAAAGAGAGGTGGATGAGTTATGAGAATTTTGCTCGAGTAAATTTTATATACGCACCCGTGCACGTACCGTACtgaacatgtaaataattttgtctttttctaaTTCTTTTTCTGGCTATCCTGTATTGAAATGTACAGCTGCAAACGGATCCGGGGTTAAATCTCAATGCTAAAACGATCAATAATGACCTTGACGCAGTCGCAACGCATCACGCCGCGTCTCGAAAGCTCTTATTCGGTTCTGTAAAAACTACTGGAAATGTAAATATGACTCATTTTTGGTGCTTAACGATTCGCTCTGCCAGTCGATCGTTATAGTAATGAATGGGGTGTTCATATTCATAACTTAAGTGTGTCCGTTTAAATACTGATTCTGTGTATTAGTTAGTCAATTGTAGAGATGTTTTCACGAATTAACTAATAAAGTTCGtttataaagctgaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60812 lncRNA downstream 334333 31977714 ~ 31978466 (-) True G41065
TU60811 lncRNA downstream 335748 31975936 ~ 31977051 (-) True G41064
TU60785 lncRNA downstream 408012 31723742 ~ 31904787 (-) True G41047
TU60963 lncRNA upstream 71496 32386127 ~ 32386472 (-) True G41177
TU60989 lncRNA upstream 123988 32438619 ~ 32439145 (-) True G41198
TU60982 lncRNA upstream 129651 32444282 ~ 32445281 (-) True G41191
TU61018 lncRNA upstream 162631 32477262 ~ 32477840 (-) True G41216
TU61019 lncRNA upstream 165724 32480355 ~ 32480713 (-) True G41217
XM_043240756.1 mRNA downstream 2659 32301359 ~ 32310140 (-) True zgc:73226
XM_043240763.1 mRNA downstream 19023 32214031 ~ 32293776 (-) False LOC122346090
XM_043240762.1 mRNA downstream 19024 32214031 ~ 32293775 (-) False LOC122346090
XM_043239627.1 mRNA downstream 138735 32113896 ~ 32174064 (-) True tnca
XM_043239628.1 mRNA downstream 139383 32113896 ~ 32173416 (-) False tnca
XM_043240476.1 mRNA upstream 1056 32315687 ~ 32342744 (-) True LOC122345937
XM_043238594.1 mRNA upstream 101594 32416225 ~ 32421598 (-) True ostf1
XM_043239474.1 mRNA upstream 144827 32459458 ~ 32464623 (-) True LOC122345374
XM_043238262.1 mRNA upstream 323629 32638260 ~ 32681474 (-) False bmpr1ba
XM_043238261.1 mRNA upstream 323629 32638260 ~ 32681474 (-) True bmpr1ba
XR_006251085.1 other downstream 19017 32214276 ~ 32293782 (-) False LOC122346090
TU61129 other upstream 429536 32744167 ~ 32745881 (-) False LOC122345737

Expression Profile