RNA id: TU60989


Basic Information

Item Value
RNA id TU60989
length 389
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G41198
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 32438619 ~ 32439145 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGAATGGCTACCGACCTCGTTATCTGTGCCTACATCAATGCAGACTGGCAGACAACTCTCAGGTCTGATTCCAGCACAGGCCGTATAAAGACACAGCTTTCCTACAGGAATACCCATCCCATACACTCCCAGATCCCCCAGACCCAGGATACGCTCACCGTCCGTCACTACTACagcctgcaaacacacacacacacacacacacacacacacacacCTTGACACTGGTTTCTGGCCAATTATCCAATATGGAACGAACATGTCCTTGGTCcttaatagaaataaacagaCCTCTGTGGAAAAAGACCAAAATTTTAATCTCtctctgcaaaaacaaacatacaacaaaCCAGTCTTTCAGAGTAAATCTCTCATATTATGACAAAAT

Function

GO:

id name namespace
GO:0009410 response to xenobiotic stimulus biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60963 lncRNA downstream 52147 32386127 ~ 32386472 (-) True G41177
TU60812 lncRNA downstream 460153 31977714 ~ 31978466 (-) True G41065
TU60811 lncRNA downstream 461568 31975936 ~ 31977051 (-) True G41064
TU60785 lncRNA downstream 533832 31723742 ~ 31904787 (-) True G41047
TU60982 lncRNA upstream 5137 32444282 ~ 32445281 (-) True G41191
TU61018 lncRNA upstream 38117 32477262 ~ 32477840 (-) True G41216
TU61019 lncRNA upstream 41210 32480355 ~ 32480713 (-) True G41217
TU61093 lncRNA upstream 74247 32513392 ~ 32527069 (-) True G41273
TU61133 lncRNA upstream 328041 32767186 ~ 32767409 (-) True G41303
XM_043238594.1 mRNA downstream 17021 32416225 ~ 32421598 (-) True ostf1
XM_043240476.1 mRNA downstream 95875 32315687 ~ 32342744 (-) True LOC122345937
XM_043240757.1 mRNA downstream 123988 32312799 ~ 32314631 (-) True LOC122346085
XM_043240756.1 mRNA downstream 128479 32301359 ~ 32310140 (-) True zgc:73226
XM_043240763.1 mRNA downstream 144843 32214031 ~ 32293776 (-) False LOC122346090
XM_043239474.1 mRNA upstream 20313 32459458 ~ 32464623 (-) True LOC122345374
XM_043238262.1 mRNA upstream 199115 32638260 ~ 32681474 (-) False bmpr1ba
XM_043238261.1 mRNA upstream 199115 32638260 ~ 32681474 (-) True bmpr1ba
XM_043238263.1 mRNA upstream 199115 32638260 ~ 32657179 (-) False bmpr1ba
XM_043240243.1 mRNA upstream 245368 32684513 ~ 32719171 (-) True pdlim5a
TU60927 other downstream 124164 32283537 ~ 32314455 (-) False LOC122346085
XR_006251086.1 other downstream 144837 32214292 ~ 32293782 (-) False LOC122346090
TU61129 other upstream 305022 32744167 ~ 32745881 (-) False LOC122345737

Expression Profile