RNA id: TU61018


Basic Information

Item Value
RNA id TU61018
length 224
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G41216
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 32477262 ~ 32477840 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CAAGTTTTGAGCCTGATTTAACATCTGGACTATAATGAGCTGGACCTGAAAACCAGGAAGCAGCTCTGTCGTTTGCGGGCTTTCTCGTTCCGTGGCTCGTTGTAGTGATGGAGACCGTGCATCTTCTCAAATGATTCGCTCACGTTATATGAGCCTGGCGGAGGTGTATCCTGCCAAGAGAAATCTAATATCTAACCACAGCATCATAAACATCATCTGCACAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60982 lncRNA downstream 31981 32444282 ~ 32445281 (-) True G41191
TU60989 lncRNA downstream 38117 32438619 ~ 32439145 (-) True G41198
TU60963 lncRNA downstream 90790 32386127 ~ 32386472 (-) True G41177
TU60812 lncRNA downstream 498796 31977714 ~ 31978466 (-) True G41065
TU60811 lncRNA downstream 500211 31975936 ~ 31977051 (-) True G41064
TU61019 lncRNA upstream 2515 32480355 ~ 32480713 (-) True G41217
TU61093 lncRNA upstream 35552 32513392 ~ 32527069 (-) True G41273
TU61133 lncRNA upstream 289346 32767186 ~ 32767409 (-) True G41303
XM_043239474.1 mRNA downstream 12639 32459458 ~ 32464623 (-) True LOC122345374
XM_043238594.1 mRNA downstream 55664 32416225 ~ 32421598 (-) True ostf1
XM_043240476.1 mRNA downstream 134518 32315687 ~ 32342744 (-) True LOC122345937
XM_043240757.1 mRNA downstream 162631 32312799 ~ 32314631 (-) True LOC122346085
XM_043240756.1 mRNA downstream 167122 32301359 ~ 32310140 (-) True zgc:73226
XM_043238262.1 mRNA upstream 160420 32638260 ~ 32681474 (-) False bmpr1ba
XM_043238261.1 mRNA upstream 160420 32638260 ~ 32681474 (-) True bmpr1ba
XM_043238263.1 mRNA upstream 160420 32638260 ~ 32657179 (-) False bmpr1ba
XM_043240243.1 mRNA upstream 206673 32684513 ~ 32719171 (-) True pdlim5a
XM_043240117.1 mRNA upstream 247058 32724898 ~ 32733732 (-) True opn4xb
TU60927 other downstream 162807 32283537 ~ 32314455 (-) False LOC122346085
XR_006251086.1 other downstream 183480 32214292 ~ 32293782 (-) False LOC122346090
TU61129 other upstream 266327 32744167 ~ 32745881 (-) False LOC122345737

Expression Profile