RNA id: XM_043238175.1


Basic Information

Item Value
RNA id XM_043238175.1
length 2052
RNA type mRNA
GC content 0.51
exon number 3
gene id ankrd34bb
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10073972 ~ 10079484 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCGCAATGTGAGAATAATAGAGCTATCGCTTACTGACGCTGGATGTGTAGGGACTGGCGTCAGCTTGCTCTATTAAGCTTGACTGTCCTCCTGATACACGGGGTCTGTGTTGAGGTTGGTAGCTTGTTTCCAGACATGAGAGCACAGGCACTTgttctctccgtctctctcctcTATCTGTGCCACTCTTTCATTCACCCTCAGTGAGTGCACATCTGCACACGTTTATCTCCCACTTCAAGCTTTAGTCTCACCGCTGGATTACTTGTCTGTTGCAAAGGTGACATGCCACAGGAACAAGCTATTGGAAAACAAGAGCTGCAGCTGGTTTAAAAGAGAAGTCAAAGAAATCAGCTTCTATGATCTACTGAGCCGACGTGACATTAGCCTCTCAGCGGTCTCACCACTTAATCATGGAAGACTCGACAGAGGTGCGGACGGATGGAAACTCTTTACTTAAAGCAGTGTATCTGTGCCGCCTGAGGCTGACGCGTTTGCTGCTGGAAGGAGGGGCTTACATTAATGAGAGTAATGAGAGAGGAGAAACTCCGCTGATGGTGGCCTGCAAAAGCCACCATGCCGATGCTCAGAGTGTGCCAAAACCCAAGATCATCAGGTATCTTCTTGAAAATGGTGCAGACCCCAACATTCAGGACAAGTCTGGTAAGACCGCCCTAATGCATGCCTGCATTGAGCGTGCAGGTGATGAGGTGCTGTCGCTTCTGCTCTCCAGTGGAGCTGACCCTAGTTTGGAGGACCACACTGGTTCCTCTGCTCTGGTCTATGCAGTTAACGCTGGAGACAAGGATGCACTGAGAGTACTACTGGAAGCCTGCAAAGCCAAGGGCAAAGAGGTTATTATCATCACAACAGATAAACTACCATCCGGAAGACAAATGACCAAGCAGTATCTGAACGTACCACCTCCTCCAAATCTTGAGGACCGTTTGCACTGTGCCCCTGCTTCATGTATGTGCCCTTCTGAAATTAAACTCTGTACCCCTTTTATCCCACCACTCCCCAATAGCCGTTCTGAGACCCTGGGATCCACACCAGCACTGCCTATTTCCAAGCCAGGATCACCGACTCAAGATTCAAGCCCTCTGCAAGCAGCTAGCGTGGCAAAGCTGTTACATCTACAGAGGCTTCACTCTGAGCCCTGGCTGAAGATCCCTCCATCTCTGCTCCTGCAGCAAAGCAAGTCCTCATCCTTAACCGAGGAGCTTCTAGATATCACTCCCGAAGAGGAGCTCTCTTTTGGGTACAATGGTTGCAGACCCCCACTAAGAGCAACAGTAGCTCGGCACCAAAGCATTGACGCCAAGGCCTTCGAGACAACATCCGATGCTGAAAGAGAACTAACAAAAGAACAGAAATGGCTTAGTAGAAAAATGTCCTATGATGGTGAGCTGCTACCGCACTCTTCCTCGCATCAGAACCTCAAACAAGCATCCATCTCAGATGCTGCTCCTGTGGACCGAGATACAGACTGTCTTCCCAACCTGGCCGTTTCAAGCCTACGCAATGTGTTTCGCCGGCGCAACATCGGAATGGACCACTACAGTTCTGACTCTCAGTTGCCTCAGTTTGGGAGCCAACCCTCTGAAGATCTCGGGAAGACTGGAGGCGGATACGCGGGGACGGAGAAACGCAAGCTTGTTACCAGCCGTTCCTCCACTCTCTCTGGATCCAGAGAGTCTCTGGAGAGTCTCGTTCAGAGGAGGAGCCCGGCCATGCTGGAGCGGAGGGGATCCGGAGCCCTGCTCTTAGACCATATCTCACAGACCCGGCCTGGTTACCTGCCACCTCTCAATCCGCATGCACCCATTCCAGATATTAAAGTCAATAACAGTGTTGGTCTCAACAGTGGAAGCAAGCCTGTGGCAGGAACTCCACCCATTGTTTCTGGATCGAGGCATTTTGTGCCCTGTGCCCCGAGCCATCCTAGAGATCACAAGAACAAAAAGAGTCTGCTAAGACGACACTCCATGCAAACCGAGCAGATCAAGCAGCTGGTCAATTTTGAGGAGATCTTCGGTCAGTAAACACCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU51347 lncRNA downstream 295734 9777633 ~ 9778238 (-) True G34877
TU51341 lncRNA downstream 307365 9766268 ~ 9766607 (-) True G34871
TU51339 lncRNA downstream 309440 9764073 ~ 9764532 (-) True G34869
TU51125 lncRNA downstream 825931 9246920 ~ 9248041 (-) True G34704
TU50983 lncRNA downstream 1013158 9013306 ~ 9060814 (-) True G34594
TU51619 lncRNA upstream 201925 10281409 ~ 10296141 (-) True G35035
TU51637 lncRNA upstream 258263 10337747 ~ 10341167 (-) True G35047
TU51725 lncRNA upstream 299282 10378766 ~ 10378998 (-) True G35107
TU51762 lncRNA upstream 433446 10512930 ~ 10513285 (-) True G35139
TU51766 lncRNA upstream 437187 10516671 ~ 10517342 (-) True G35142
XM_043239513.1 mRNA downstream 13551 10058909 ~ 10060421 (-) True ak6
XM_043239509.1 mRNA downstream 15198 10053979 ~ 10058774 (-) True marveld2b
XM_043239511.1 mRNA downstream 21410 10046898 ~ 10052562 (-) False oclnb
XM_043239512.1 mRNA downstream 21413 10046898 ~ 10052559 (-) False oclnb
XM_043239510.1 mRNA downstream 21414 10046898 ~ 10052558 (-) True oclnb
XM_043240290.1 mRNA upstream 807 10080291 ~ 10083670 (-) True dhfr
XM_043240288.1 mRNA upstream 4235 10083719 ~ 10087885 (-) False si:ch211-214j8.12
XM_043240289.1 mRNA upstream 4235 10083719 ~ 10087885 (-) True si:ch211-214j8.12
XM_043240817.1 mRNA upstream 11202 10090686 ~ 10094576 (-) True bco2l
XM_043238926.1 mRNA upstream 35297 10114781 ~ 10118225 (-) True klf9
TU51236 other downstream 671349 9337828 ~ 9402623 (-) True G34789
TU51091 other downstream 853465 9215508 ~ 9220507 (-) False vamp5
TU50964 other downstream 1143919 8929470 ~ 8930053 (-) True G34580
TU50888 other downstream 1396254 8674549 ~ 8677718 (-) False LOC122345093
TU50638 other downstream 1642397 8429700 ~ 8431575 (-) True timm8b
XR_006251099.1 other upstream 245631 10325115 ~ 10335342 (-) False si:dkey-96l17.6
TU51745 other upstream 381724 10461208 ~ 10461709 (-) True G35122
TU52098 other upstream 788880 10868364 ~ 10874064 (-) True G35371
TU52116 other upstream 844443 10923927 ~ 10926163 (-) True G35384
TU52323 other upstream 1340471 11419955 ~ 11467122 (-) False hmgn7

Expression Profile