RNA id: XM_043238233.1



Basic Information


Item Value
RNA id XM_043238233.1
length 2310
RNA type mRNA
GC content 0.59
exon number 18
gene id ciz1a
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30660119 ~ 30672096 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCCGGTCCTGCAGGCGGCGCTGTGAGCTCCTCGCTGTGGTCGCGCTCAGACCGGTGAGAGTGTGTTAGCTTTAGCGCCGCTAACGTGACAGAGGAACTTTCAACAGGCTGTCGCTCGTTTCTCCGCTATTCAACTCATAACCCCGTCGGCAGAGTTCgctGCGGCGCAGCAGTGAATCTCTGGGACCGTCAGCATGTTTAACCctcaccagcagcagcagcagtttcATCAGCATCTGCGGCAGCTTCAACAGCTGTTCCAGCAGCAGACGCCGCCTCcgcctcctccacctcctcctccgccCCAGCCTCCGCCCGCTCATCACATCACACACGCACGgccgATGGCGGCTCCCGCTCCTCCGTCTCGAATGGTGAATCTGTGCTCGGCCACGCAGACCATCATCGCTCCTAACCCCATGCTGCAGGGGGCGCTGCTCATGCAGCAGATGCAGGCGGGCGGCATGCGAGGGTTTGCGATGGGAGGCCAGCAGTTCCCTCAGTTCTTCGCTGCGGGGTCCAGAGCGTCTCTTCTGGGGCCCGTCCCGATGGGAGTCGCCATCAAAACACCGCACATGGGATTCCCACGCCACTTCACGCCACACACACGCTACTTCACCAACGAGTTTCAGGCTCGTCAGCCGGACAGAAAGAGGGAAAACGAGCAGAAGTCAGCAGGCAGCAGCGACAGCCAATCGGAagccagcagcagcagagCTGAAGAGGCGTCCGCTCCGGCCGATCCGGGATGTCAGGGGTCTTCAGAGCAGCCCGACGAACCCGCCGccaagaaacacaaaacacaggaGTCAGAGGATCCTGTGGAGACGGAATCAGCTCAGAGCACTGAATACAAGAGCCCTGACCCCGCAGAGCTGAGTCTGCAGGACGGAGGTGGAGTGGACGGAGCGCTGGCCGCCGAAGCAGATGAGCCGAGTCAAGCGGCCGAGCAGGTTGAAAGCACCGAAGCTCTGGAGAAAGACGTGGAGCAACAGATGAGCGAGGGTCCAGACGACACCACGGGCTCCGACTCGCTCTCAGAGGTCAAGGAGAGTGCAGATGCTCCTGAAGAGGTCAAAGACGGCGCTGCAGAGACCTCCAGCAAGTTCTTCTGCTATATTTGCAACATCACTTGCCATAACCAGCAAAATTTCCAGAGCCATATGAACGGGCTGACGCACCAGCAGAAGATGATGGAGATCCAGCACATGAGCAACGCTTGTCTCGTCACGCTGCTGCCCCGCGTCCAGGAGTCCCTGCAAGGAGCTCGCCGAGACGGTGAGAAGAGGCCGGGTCTGCAGAGATGGTGCTCCACCTGTCAGACTCACTTCACCACCAACGTCATGGAACACCGCAGAACCAAGGAGCACAAGcgcTGTAGCCGTCCGTCCTCGTCCTGCACGGTGTGTAAGCTGCTCTTCAGGACACACAGAGAGTTTGTGGAGCACATGCAGTCGTCGGAGCACAAGCAGCGAGTCCAGCAGCTGTGGAAGGACTCGGATCACATCAACACCGACATGTTCCTGGGAGAAGAGGACGGAGAGGGCAGCGACGACgagagggaggaagaggagaacgggaagGAGGGCTTGGCCGCTCAGATGGAGGTGACTCTGGAGGATCTGACTGAAGACGAGGAGTTTGACTCAGACACAGTGTATGgctcCAGTTTCGTGGTGCCCGTGGCTGGTTTTCTCTGTCGTCTCTGTAATCAGTTCTATCACTTCGAGTCTTCGGCTCGACACACACACTGCAAGACGCTCAAACACTTCCAGAGTCTCAAGCGTTATAAAGCCTTAAAGAAGCACGAAGACTCCGGCTCGACCTCAGCAGAACCAGCAGACCCCATCAGTCCAGATCAGACCGCTCTCCCGCCAGAACCAGCCCCGCAGACCTGTACCTCACCTCCCGGCAGCCCGCAGGAAGTCCAGCCACCAGCACAGGAAGAAGCCGTTGCCGTGGAGCCGGGGCCCGGGCAGGAGCGCCCGGGGCGGGGCAGGACTCCTGCTAAGAGACGAGGACGAGGAGCGAGACGCCGCTGAGACGCGCAGAGGACCTGAGTGAAAGCACTCGTGCCACAGATCCAGCCTCTCACCTGTTTGTAGAGTCCTGAGCACGCGGCATGGGATACGCCGCAGGAGAGCGTGACCCTGAACGGGTCGCTTCCATCCAAACATGTTCAGCTCAGAGTTCAGCCCAAAACCAGCAGGATGTGTGTCCTTCAGACTCAGACTCTCATAGCCTCTTTCACctaatatatactgtgtgtgtatatatatatatatcagattaATGTGAGGTTTAGTTTACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU60227 lncRNA downstream 69479 30590197 ~ 30590640 (-) True G40701
TU60224 lncRNA downstream 90019 30567251 ~ 30570100 (-) True G40698
TU60183 lncRNA downstream 93963 30565684 ~ 30566156 (-) True G40672
TU60181 lncRNA downstream 95742 30564117 ~ 30564377 (-) True G40670
TU60202 lncRNA downstream 141664 30516065 ~ 30518455 (-) True G40684
TU60254 lncRNA upstream 7062 30679158 ~ 30731238 (-) True G40711
XR_006251069.1 lncRNA upstream 36677 30708773 ~ 30710678 (-) True LOC122345983
TU60290 lncRNA upstream 36774 30708870 ~ 30709891 (-) False LOC122345983
TU60247 lncRNA upstream 48096 30720192 ~ 30725226 (-) True G40708
TU60299 lncRNA upstream 98618 30770714 ~ 30772024 (-) True G40739
XM_043239944.1 mRNA downstream 4162 30653163 ~ 30655957 (-) True surf2
XM_043239943.1 mRNA downstream 7809 30646286 ~ 30652310 (-) True surf4
XM_043240479.1 mRNA downstream 15372 30622204 ~ 30644747 (-) False ass1
XM_043240478.1 mRNA downstream 15382 30622204 ~ 30644737 (-) True ass1
XM_043240481.1 mRNA downstream 15389 30622204 ~ 30644730 (-) False ass1
XM_043240578.1 mRNA upstream 62008 30734104 ~ 30754940 (-) False golga2
XM_043240576.1 mRNA upstream 62008 30734104 ~ 30754940 (-) False golga2
XM_043240577.1 mRNA upstream 62008 30734104 ~ 30754940 (-) False golga2
XM_043240575.1 mRNA upstream 62008 30734104 ~ 30754940 (-) False golga2
XM_043240570.1 mRNA upstream 62008 30734104 ~ 30754940 (-) False golga2
TU60233 other downstream 46978 30604844 ~ 30613141 (-) False fubp3
TU60232 other downstream 56626 30600901 ~ 30603493 (-) False fubp3
TU59790 other downstream 566606 30091949 ~ 30093513 (-) False rnf170
TU59791 other downstream 566606 30091949 ~ 30093513 (-) False rnf170
TU59650 other downstream 733286 29926385 ~ 29926833 (-) False LOC122344966
TU60266 other upstream 117537 30789633 ~ 30792719 (-) True G40713
TU60335 other upstream 147419 30819515 ~ 30826358 (-) True G40752
TU60340 other upstream 147419 30819515 ~ 30826358 (-) False G40752
XR_006251005.1 other upstream 1030357 31702453 ~ 31711737 (-) True apooa
TU60769 other upstream 1049174 31721270 ~ 31722906 (-) True G41035

Expression Profile