Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043238245.1 |
| length | 1246 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 10 |
| gene id | rcl1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056703.1 |
| NCBI id | CM032072.1 |
| chromosome length | 32833783 |
| location | 31053924 ~ 31064355 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006396 | RNA processing | biological_process |
| GO:0042254 | ribosome biogenesis | biological_process |
| GO:0005730 | nucleolus | cellular_component |
| GO:0003824 | catalytic activity | molecular_function |
| id | description |
|---|---|
| K11108 | RCL1; RNA 3'-terminal phosphate cyclase-like protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU60395 | lncRNA | downstream | 14467 | 31038405 ~ 31039457 (-) | True | G40794 |
| TU60379 | lncRNA | downstream | 75602 | 30977609 ~ 30978322 (-) | True | G40782 |
| XR_006250922.1 | lncRNA | downstream | 79041 | 30974318 ~ 30974883 (-) | True | LOC122344702 |
| XR_006250921.1 | lncRNA | downstream | 90417 | 30959444 ~ 30963507 (-) | True | LOC122344701 |
| TU60352 | lncRNA | downstream | 128727 | 30920851 ~ 30925197 (-) | True | G40760 |
| TU60399 | lncRNA | upstream | 23837 | 31088192 ~ 31094923 (-) | True | G40798 |
| TU60429 | lncRNA | upstream | 156462 | 31220817 ~ 31222194 (-) | True | LOC122344940 |
| XR_006250951.1 | lncRNA | upstream | 156529 | 31220884 ~ 31222257 (-) | False | LOC122344940 |
| TU60455 | lncRNA | upstream | 208331 | 31272686 ~ 31273001 (-) | True | G40841 |
| TU60456 | lncRNA | upstream | 215822 | 31280177 ~ 31280431 (-) | True | G40842 |
| XM_043238956.1 | mRNA | downstream | 1335 | 30978593 ~ 31052589 (-) | True | mcc |
| XM_043238243.1 | mRNA | downstream | 102436 | 30942514 ~ 30951488 (-) | True | cux2a |
| XM_043238238.1 | mRNA | downstream | 112042 | 30920817 ~ 30941882 (-) | True | LOC122344688 |
| XM_043238521.1 | mRNA | downstream | 218190 | 30831189 ~ 30835734 (-) | True | rabepk |
| XM_043238534.1 | mRNA | downstream | 284017 | 30765631 ~ 30769907 (-) | True | LOC122344907 |
| XM_043238241.1 | mRNA | upstream | 9688 | 31074043 ~ 31081265 (-) | True | LOC122344691 |
| XM_043238248.1 | mRNA | upstream | 44368 | 31108723 ~ 31112733 (-) | True | rplp0 |
| XM_043238526.1 | mRNA | upstream | 78222 | 31142577 ~ 31155113 (-) | True | gusb |
| XM_043238527.1 | mRNA | upstream | 78222 | 31142577 ~ 31154983 (-) | False | gusb |
| XM_043238259.1 | mRNA | upstream | 126808 | 31191163 ~ 31196967 (-) | True | ca4a |
| TU60335 | other | downstream | 227566 | 30819515 ~ 30826358 (-) | True | G40752 |
| TU60340 | other | downstream | 227566 | 30819515 ~ 30826358 (-) | False | G40752 |
| TU60266 | other | downstream | 261205 | 30789633 ~ 30792719 (-) | True | G40713 |
| TU60256 | other | downstream | 357236 | 30631028 ~ 30696688 (-) | False | G40711 |
| XR_006251005.1 | other | upstream | 638098 | 31702453 ~ 31711737 (-) | True | apooa |
| TU60769 | other | upstream | 656915 | 31721270 ~ 31722906 (-) | True | G41035 |
| XR_006251008.1 | other | upstream | 1057929 | 32122284 ~ 32173823 (-) | False | tnca |
| XR_006251085.1 | other | upstream | 1149921 | 32214276 ~ 32293782 (-) | False | LOC122346090 |
| XR_006251086.1 | other | upstream | 1149937 | 32214292 ~ 32293782 (-) | False | LOC122346090 |
