RNA id: XM_043238365.1



Basic Information


Item Value
RNA id XM_043238365.1
length 794
RNA type mRNA
GC content 0.41
exon number 5
gene id LOC122344793
representative False

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10890842 ~ 10893594 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCTGTTGAGAATTGTATCAAACTGCATCACACATCCTGTTTAGCACAAGACACCATGAGAACCGGACaaacttcttttcttttgtctgtACAGCACTGGATCCATCTGTTGATATTCTTTTTAACTCTTATAACAGGGGTCTTGACAGATGAAGAAGTGATAAGAGCTCTGTTGGGTGGGAGTGCGTCGCTTAACTTTAAGGTTAAAGCAGACATGAAAGTAACCCTAGCTGTATGGAAAAAGTGTCCAGATGAGAAGGTTTTTGTGTACAGCCCCATCCATGGGCTTACTATATTTGACAACAACTATGCTGGGCGTCTTTCCATAAAATCGAACTACAACATTATACTGGATAAAATACAAGAGAGCGACTTTGGGACTTACTGTTATGAACTCACTACTTTCCCAGATGGGAGTCTTCAAGGAACAAATAAGCTAGAGAAAGCAACAGAAAATGGTGACTTGCCCATCATGATAATCTCCGCGGGTTGCAGCATAGGTTTAATAGTGTTATGTGGAATCGTCACTGGAGTGGTTTGCTATAAGAAGAGAAAAAGCAGCCTTGCGTTGGATCACGGAGGACCTCCTGGCAGTCAGCTGAAAAATAAGAAGCAACCCAATGAGAGCATAAGCTCACAGAATGAAGAAGACTTCAATTACCTAAATATCACTTAACCTTCCACACTATGGATTCTGAAGACATCACTGCCGATTGACTGGATTCATGATAACATGTCACTGCTTCCActtcaaaaatgcaaacatacaaaataaagagCTTTTGCACAAAGCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251094.1 lncRNA downstream 4104 10875648 ~ 10886738 (-) True LOC122346117
TU51839 lncRNA downstream 52545 10838005 ~ 10838297 (-) True G35203
TU51837 lncRNA downstream 57247 10832858 ~ 10833595 (-) True G35201
TU51829 lncRNA downstream 100470 10766861 ~ 10790372 (-) True G35194
TU51823 lncRNA downstream 138938 10751335 ~ 10751904 (-) True G35189
TU52118 lncRNA upstream 38756 10932350 ~ 10933745 (-) True G35385
TU52130 lncRNA upstream 45101 10938695 ~ 10939486 (-) True G35388
TU52135 lncRNA upstream 66717 10960311 ~ 10963602 (-) True slc25a15b
TU52137 lncRNA upstream 66717 10960311 ~ 10963602 (-) False slc25a15b
TU52162 lncRNA upstream 145096 11038690 ~ 11039232 (-) True G35410
XM_043238338.1 mRNA downstream 1057 10887152 ~ 10889785 (-) True ctsll
XM_043238725.1 mRNA downstream 129617 10753401 ~ 10761225 (-) True dgcr8
XM_043238727.1 mRNA downstream 141600 10738969 ~ 10749242 (-) True atp6v0a2b
XM_043239685.1 mRNA downstream 279300 10609022 ~ 10611542 (-) True rhbdd3
XM_043239823.1 mRNA downstream 358053 10531654 ~ 10532789 (-) False mrpl41
XM_043240653.1 mRNA upstream 558 10894152 ~ 10900274 (-) True zdhhc23a
XM_043239137.1 mRNA upstream 15304 10908898 ~ 10918493 (-) True atp6v1aa
XM_043239136.1 mRNA upstream 15304 10908898 ~ 10918401 (-) False atp6v1aa
XM_043238337.1 mRNA upstream 60176 10953770 ~ 10957971 (-) True mpdu1a
XM_043239666.1 mRNA upstream 70007 10963601 ~ 10969118 (-) False slc25a15b
TU52098 other downstream 16778 10868364 ~ 10874064 (-) True G35371
TU51745 other downstream 429133 10461208 ~ 10461709 (-) True G35122
XR_006251099.1 other downstream 555500 10325115 ~ 10335342 (-) False si:dkey-96l17.6
TU51236 other downstream 1488219 9337828 ~ 9402623 (-) True G34789
TU51091 other downstream 1670335 9215508 ~ 9220507 (-) False vamp5
TU52116 other upstream 30333 10923927 ~ 10926163 (-) True G35384
TU52323 other upstream 526361 11419955 ~ 11467122 (-) False hmgn7
TU52322 other upstream 570237 11463831 ~ 11467122 (-) True hmgn7
TU52344 other upstream 690186 11583780 ~ 11652627 (-) True G35554
TU52507 other upstream 907720 11801314 ~ 11815810 (-) False msna

Expression Profile