RNA id: XM_043238374.1


Basic Information

Item Value
RNA id XM_043238374.1
length 1917
RNA type mRNA
GC content 0.46
exon number 8
gene id mogat3b
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14276095 ~ 14280289 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGCGAGAGGAGCGTTCGTTCAACCAAACCGCGCCGCCGGCGTTTTGGCGTAGCAGAGGTGTTTAAACCGTATCTCACGACCCAGAGTCTTATTCTGACACAAGAGTAGGCGTTTGCGGCGTTTCCGTTGCCTGGGCGTGCCAACAAAGACTCGGAAGATTTGTTCGCCGCTTACAAACGATTCCGAAAAACGAAAGAAAAGGGTGACTTAAACGGCTTTCAGTCATGCGGACGCGGATCCGTGAGTGGCTGGAGATAAACACCAGATAGCCAGTCCCGAAAGTGGCCACATGCATTTACGATGACGCGATTAGGGAACGAATCGTTATCTGTTTGACCAATTGAACCGATCAAAGTGCGAGCAAGGAGCAGGAGAGGCGTCTGTCAGGGAAGGTGAGGAAGAGGAATCGTTTGCTACAGGGATCACTAAAATTGGCCATTTAATGGGAACAGATAACGAGATAAAGGGGAAGGAGGACAAGTCTCAGTGGAAGGAGTTAATCGAGGATATAAGCGTTTTACAATGggtgttttcatttctgtttttaggaaCGGCCTGTCTGCTGTTGATGATCTATATGATGTTTACCTCCCTGTGGCTCATTCCCACACTCTACTTCTCATGGCAGATCTATGATTGGCATACACCCGAAAGAGGTGGCAGACGAACAAAATTTGTGAGAAGCTGGGAAGTATGGAAACACTACAGAGACTATTTTCCTGTGAAGCTGGTAAAAACCGCTGAATTGAATCCCAGTAAGAACTATATAATGGGCTGTCACCCCCATGGCATCATGTGTGTGGGAGCCTTCTCGTGTTTCAGCACAGACCGTAATGGATTTGCGGAAACCTTTCCTGGAATACGCTCCACTCTTGCGATTCTGGCCGGACTTTTCCGCCTTCCTCTTTTCAGAGAGTATATTTTGTCTGCTGGTCTGCTGCCTGTGAGTAAGGGGAGTTTAGATTACGTTCTGAGCCGCACTGGTTCGGGTAACGCCGTGGTCATCATCATCGGTGGGGCAGAGGAATCGCTGACCTCATCTCCAGGAGTAAACACTTTAGTCATGAAACATAGGAAGGGTTTTGTACGACTGGCCCTTGAACACGGGGCTGACCTGGTTCCCGTGTACTCCTTCGGTGAGAATGAGCTGTTCCCACAGGTGGTTCTGTCTGAGGGCAGCATCGGCCGACGGCTCCAGGCTCTTTTTAAGCAGGTTATGGGTTTTGCTCCGTGTCTCTTCACCGGAGGGCGCCGGCTGCTTCTGCCATACAGACGCCCCGTCACCACTGTGGTGGGTCGTCCCATTACCGTGCCTCAGGTGGACAGCCCGTCGCAGGAACAGGTGGATCATTACCACGGGTTATACATGAAGTCTCTGTCTGAACTTTTCCACGAACACAAAACCAGCTGCGGACTGGCCGACACACACGAGCTGCGCTTCATATAGAAATGCTGGAAAGCACAAAGTCATTGAAACAACTGCCGGAATTACGACGTGGGACAGAAATACTTATTTCTGTACGGTTTTCCATGTGAACGGGTTAGCTTTTTCGGTTCTCCAAAAATACGCTCAATGCACCAAGTGAATGTCTGAATCAGAACGACGCTCTCTTCCTGAGGAGCTGTATATGTGCTATTAACGAACACAAAGAACTTGAGCcgtccaaaaaaagaaagatttatcACCTTTATCCGTGATGGGAATTTAAAACGTTAGTGCTCATAATGAAAAGATGTATAAAGAGTATTTTTAAGAAGTATGAGAATATAATTtcctgaaaataattattttaatatattacacgTGTATATTGATGCTTTTACCTTAAAATTCATCATTAGAATTTTAAAGTGCAAAGTCTTAAAAATACCTCTCTTcttgaaaaacaaatcataaaacaagcacatttttacca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU53675 lncRNA upstream 228601 14046777 ~ 14047494 (+) True G36420
TU53657 lncRNA upstream 268693 14005771 ~ 14007402 (+) True G36408
TU53655 lncRNA upstream 272564 14000526 ~ 14003531 (+) True G36406
TU53654 lncRNA upstream 275758 13999100 ~ 14000337 (+) True G36405
TU53521 lncRNA upstream 301336 13974532 ~ 13974759 (+) True G36332
TU53795 lncRNA downstream 41267 14321556 ~ 14322681 (+) False G36503
TU53796 lncRNA downstream 44062 14324351 ~ 14326754 (+) True G36503
TU53787 lncRNA downstream 52779 14333068 ~ 14335183 (+) False LOC122345214
TU53790 lncRNA downstream 52779 14333068 ~ 14337765 (+) True LOC122345214
TU53801 lncRNA downstream 61634 14341923 ~ 14342507 (+) True G36507
XM_043238376.1 mRNA upstream 50099 14221600 ~ 14225996 (+) True gltpd2b
XM_043240389.1 mRNA upstream 119561 14145969 ~ 14156534 (+) True gnb2
XM_043240387.1 mRNA upstream 119561 14145969 ~ 14156534 (+) False gnb2
XM_043240388.1 mRNA upstream 119561 14145970 ~ 14156534 (+) False gnb2
XM_043239093.1 mRNA upstream 146046 14124109 ~ 14130049 (+) True hsd20b2
XM_043238381.1 mRNA downstream 2791 14283080 ~ 14287440 (+) True si:ch211-271e10.2
XM_043238978.1 mRNA downstream 22455 14302744 ~ 14305304 (+) False LOC122345142
XM_043238976.1 mRNA downstream 22533 14302822 ~ 14305304 (+) False LOC122345142
XM_043238977.1 mRNA downstream 22533 14302822 ~ 14305304 (+) False LOC122345142
XM_043238981.1 mRNA downstream 26548 14306837 ~ 14310076 (+) True LOC122345145
TU53623 other upstream 290389 13984097 ~ 13985706 (+) True ins
XR_006251084.1 other upstream 1468879 12803952 ~ 12807216 (+) False LOC122346073
TU52846 other upstream 1570854 12703371 ~ 12705241 (+) False iscu
TU52818 other upstream 1759987 12514076 ~ 12516108 (+) False si:ch211-225b11.4
TU52594 other upstream 2020423 12249138 ~ 12255672 (+) False G35720
TU53776 other downstream 10131 14290420 ~ 14292500 (+) True G36495
XR_006250972.1 other downstream 19754 14300043 ~ 14305304 (+) True LOC122345142
XR_006250973.1 other downstream 19754 14300043 ~ 14305304 (+) False LOC122345142
TU54000 other downstream 367200 14647489 ~ 14651911 (+) False fgf5
TU54012 other downstream 438243 14718532 ~ 14720487 (+) True G36640

Expression Profile