RNA id: XM_043238413.1


Basic Information

Item Value
RNA id XM_043238413.1
length 3192
RNA type mRNA
GC content 0.46
exon number 15
gene id eef2l2
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15451024 ~ 15457371 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCCACATGACTCCGCAGTGCTTTCTGTCGCAGCATAAACTAAGATTGTACGtcacagtctctctctttcgcCCAAGTCCTCAGCGGAGAGGAGCAGCGACCGCAGCGCGAGGCCGTCCTAGACTTGGGAGCCAGTCGCCAAAATGGTGAACTTCACGGTAGACCAGATTCGGGAGATCATGGACAAAAAGTCCAATATCAGGAACATGTCTGTGATCGCCCATGTGGACCATGGGAAATCTACTCTCACTGATTCCTTGGTGTGCAAAGCCGGTATTATTGCTTCTGCACGTGCAGGAGAGACCCGATTTACTGACACCAGAAAAGACGAACAGGAGAGATGTATCACCATTAAGTCAACGGCCATCTCTCTATATTATGAGCTCAGTGAGAATGACTCGGCCTTCATTAAACAGTGTAAGGATGGTTCTGGCTTCCTGATCAACCTGATCGACTCACCTGGACATGTTGACTTCTCTTCTGAGGTGACAGCAGCTCTGAGAGTTACAGATGGTGCCCTTGTAGTGGTAGACTGTGTTTCAGGTGTATGTGTGCAGACTGAGACTGTGTTGAGACAAGCCATTGCAGAGCGCATCAAGCCTGTCTTGATGATGAACAAGATGGACCGTGCCCTCCTTGAGTTGCAGCTGGAAACCGATGAGCTTTTCCAAACCTTCCAAAGGATTGTGGAAAATGTTAATGTCATCATCTCAACTTACGGAGAAGGAGAGCATGGACCAATGGGAAACATTATGGTGGATCCTGTGGTTGGGACTGTGGGATTTGGATCAGGCCTCCATGGCTGGGCTTTTACTCTGAAGCAGTTTGCTGAGATGTATGTGGCCAAGTTTGCTGCTAAGGGAGATAAGAAAAAAGCAGACCTTCCTCCAGCAGAACGGGCTAAGAAAGTGGAGGAGATGATGAAAAAGCTTTGGGGAGATAAGTACTTTGATCCCTCCTGTGGAAAATTCAGCAAATCAGCAACCAATGCAGATGGAAAGAAGCTTCCTCGTACCTTCTGCCAGCTTGTCTTGGATCCCATCTTTAAGGTTTTTGATGCCATTATGAATTTCAAAAAAGAAGAGACCCAGAAACTGATTGATAAGCTCGAAGTAAAGCTTGATGCAGAAGACAAAGAAAAGGAAGGAAAACCTCTACTTAAGGCTGTGATGCGCCGCTGGTTGCCAGCAGGTGATGCTTTGCTCCAGATGATCACCATCCATCTTCCTTCTCCTGTCACTGCCCAAAGGTACCGCTGTGAATTGCTTTACGAGGGTCCTGGAGATGATGAGGCAGCCATGGGTATAAAGAACTGTGATCCTAAAGCTCCTCTCATGATGTACATCTCTAAGATGGTGCCAACCACCGACAAGGGTAGATTCTATGCTTTTGGTCGTGTTTTCTCTGGTGTCGTTTCTACAGGGCAGAAGGTGCGCATCATGGGCCCAAACTTCACACCAGGAAAAAAGGAAGACTTGTACTTAAAGCCAATCCAAAGAACTATCTTGATGATGGGTCGCTATGTAGAACCCATTGAAGATGTGCCATGTGGGAACATTGTTGGTTTGGTCGGGGTCGATCAGTTCCTGGTGAAGACTGGCACCATTACCACTTTTGAAAATGCTCACAACATGCGTGTTATGAAGTTCAGCGTTAGTCCTGTGGTGAGAGTTGCTGTGGAGGCAAAGAACCCAGCTGATCTACCAAAGCTGGTGGAGGGACTTAAACGTCTGGCCAAGTCGGATCCTATGGTTCAGTGTATCATTGAAGAGTCTGGTGAGCACATTGTGGCAGGTGCTGGTGAGCTTCATCTGGAGATTTGCCTAAAAGACCTAGAGGAAGATCATGCATGCATCCCATTGAAGAAATCAGACCCAGTTGTGTCATATCGTGAAACCGTCAGTGATGAATCAGACCAGGTTTGCTTGTCTAAGTCTCCCAACAAGCACAATCGTCTGTACATGAAATCTCGGCCTTTCCCAGATGGCCTGGCCGAGGACATCGATAAAGGTGATGTAACCGCCCGGCAGGAGCTTAAACAGAGAGCTCGCTACCTGGCTGAGAAATATGAGTGGGAAGTCGCAGAGGCCCGTAAGATTTGGTGCTTTGGACCAGATGGTACAGGGCCCAACATCCTTGTGGATATCACAAAGGGAGTTCAGTACCTGAATGAGATAAAGGACAGCGTAGTGGCTGGTTTTCAGTGGGCAACCAAAGAAGGTGCGCTCTGTGAAGAGAACATGCGGTCGGTCCGATTTGACATTCATGATGTGACTCTTCATGCTGATGCCATTCATAGAGGTGGCGGTCAGATCATTCCCACAGCCCGCAGAGTTCTATACGCTTCTGTGCTTACTGCACAGCCAAGACTCATGGAGCCCATTTACCTGGTCGAGATTCAGTGCCCGGAGCAGGTGGTTGGTGGCATCTATGGTGTGCTGAACAGAAAAAGAGGCCATGTGTTTGAGGAGTCCCAAGTGGCTGGGACACCTATATTTGTTGTGAAGGCATACCTACctgtaaatgaatcatttgGTTTCACAGCAGACCTGAGATCTAACACTGGCGGACAGGCCTTCCctcagtgtgtgtttgaccACTGGCAGATCTTGCCAGGTGATCCATATGATGTAAACAGCAAACCTAGCCAAATTGTGGCCGATACCCGTAAACGCAAAGGTCTGAAGGAGGGTATCCCAGCACTGGACAACTTCCTGGACAAACTATAAATTGCTCTGGATTGTACATTGAAGCTTATAATCTTACAACGTTAACATGATGACTCTAAAATGTATGGCATAACATTTACACAGAAAATCAACCAAGcttaatttaaacattcaaaGCTGCACAATTTGGCAGCAAATAAAACCTGAGCACATTAAACCTGTGTGGATGTGCAAACACAAAGTAAAAGCCAATACAGCACAGTAATCTGGACTTAATAattcaactttaaaaatatatttttccagaTGGATATGAAATATTGCTCTAATCACTGTGTAATGTGTATTGGTTTACATGTCTTAGAATGTATATGTATCATCATGAACTGTGCCCACCTTTTGGCAAAGTATTCAAGATTCTCAACAACATTACATGTGCCATTATCAATGGAGAGCTATGTCAATTCAAAACCTCAACCCTGACTGGGAGGGACAATAAAAGCACTGTATCAACATTTACAGCa

Function

GO: NA

KEGG:

id description
K03234 EEF2; elongation factor 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU54241 lncRNA downstream 281666 15169047 ~ 15169358 (-) True G36811
TU54112 lncRNA downstream 545403 14905385 ~ 14905621 (-) True G36714
TU54099 lncRNA downstream 569959 14880865 ~ 14881065 (-) True G36708
TU54076 lncRNA downstream 752071 14698736 ~ 14698953 (-) True G36696
TU54002 lncRNA downstream 798631 14652095 ~ 14652393 (-) True G36631
TU54472 lncRNA upstream 104351 15561722 ~ 15562078 (-) True G36967
TU54473 lncRNA upstream 104777 15562148 ~ 15562363 (-) True G36968
TU54475 lncRNA upstream 106727 15564098 ~ 15565262 (-) True G36969
TU54502 lncRNA upstream 246381 15703752 ~ 15709388 (-) False cenpv
TU54544 lncRNA upstream 256304 15713675 ~ 15713975 (-) True G36986
XM_043240656.1 mRNA downstream 83611 15350016 ~ 15367413 (-) False npr3
XM_043240654.1 mRNA downstream 83611 15350016 ~ 15367413 (-) True npr3
XM_043238862.1 mRNA downstream 142584 15293856 ~ 15308440 (-) True zfr
XM_043239960.1 mRNA downstream 158142 15280214 ~ 15292882 (-) True mtmr12
XM_043239676.1 mRNA downstream 171752 15268676 ~ 15279272 (-) True golph3a
XM_043239300.1 mRNA upstream 14721 15472092 ~ 15477073 (-) False akr1a1a
XM_043239301.1 mRNA upstream 14721 15472092 ~ 15477073 (-) True akr1a1a
XM_043240356.1 mRNA upstream 22809 15480180 ~ 15493670 (-) False dnajb5
XM_043240355.1 mRNA upstream 22809 15480180 ~ 15493594 (-) False dnajb5
XM_043240354.1 mRNA upstream 22809 15480180 ~ 15493024 (-) True dnajb5
XR_006251075.1 other downstream 83611 15350016 ~ 15367413 (-) False npr3
XR_006250970.1 other downstream 142584 15296018 ~ 15308440 (-) False zfr
XR_006251010.1 other downstream 186079 15205951 ~ 15264945 (-) False pdzd2
TU53907 other downstream 1148643 14292063 ~ 14302381 (-) True LOC122345141
XR_006250968.1 other downstream 1394319 14045477 ~ 14056705 (-) False rnf214
TU54482 other upstream 115740 15573111 ~ 15574817 (-) False alkbh2
TU54484 other upstream 115887 15573258 ~ 15574817 (-) False alkbh2
TU54499 other upstream 246381 15703752 ~ 15709388 (-) True cenpv
TU54667 other upstream 267656 15725027 ~ 15727910 (-) True emc6
TU54666 other upstream 269411 15726782 ~ 15727910 (-) False emc6

Expression Profile