Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043238442.1 |
| length | 1151 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 8 |
| gene id | smn1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056703.1 |
| NCBI id | CM032072.1 |
| chromosome length | 32833783 |
| location | 16084818 ~ 16087410 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0016358 | dendrite development | biological_process |
| GO:0007528 | neuromuscular junction development | biological_process |
| GO:0006397 | mRNA processing | biological_process |
| GO:0048936 | peripheral nervous system neuron axonogenesis | biological_process |
| GO:0048675 | axon extension | biological_process |
| GO:0008380 | RNA splicing | biological_process |
| GO:0030018 | Z disc | cellular_component |
| GO:0097504 | Gemini of coiled bodies | cellular_component |
| GO:0005681 | spliceosomal complex | cellular_component |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| K13129 | SMN; survival motor neuron protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU54726 | lncRNA | downstream | 106078 | 15950331 ~ 15978740 (-) | False | G37092 |
| TU54738 | lncRNA | downstream | 145982 | 15938120 ~ 15938836 (-) | True | G37098 |
| TU54729 | lncRNA | downstream | 173945 | 15906283 ~ 15910873 (-) | True | G37093 |
| TU54885 | lncRNA | upstream | 243521 | 16330931 ~ 16332077 (-) | True | G37212 |
| TU54932 | lncRNA | upstream | 302514 | 16389924 ~ 16460289 (-) | True | G37239 |
| TU54933 | lncRNA | upstream | 302514 | 16389924 ~ 16482086 (-) | False | G37239 |
| TU54935 | lncRNA | upstream | 302514 | 16389924 ~ 16458389 (-) | False | G37239 |
| TU54948 | lncRNA | upstream | 349059 | 16436469 ~ 16443757 (-) | True | G37247 |
| XM_043238849.1 | mRNA | downstream | 17957 | 16017834 ~ 16066861 (-) | False | rtkna |
| XM_043238846.1 | mRNA | downstream | 17964 | 16014786 ~ 16066854 (-) | False | rtkna |
| XM_043238847.1 | mRNA | downstream | 30916 | 16014786 ~ 16053902 (-) | True | rtkna |
| XM_043238848.1 | mRNA | downstream | 42790 | 16014786 ~ 16042028 (-) | False | rtkna |
| XM_043240549.1 | mRNA | downstream | 162211 | 15915364 ~ 15922607 (-) | False | si:dkey-245n4.2 |
| XM_043240447.1 | mRNA | upstream | 1655 | 16089065 ~ 16095337 (-) | True | mccc2 |
| XM_043240822.1 | mRNA | upstream | 8338 | 16095748 ~ 16114424 (-) | False | LOC122346134 |
| XM_043240821.1 | mRNA | upstream | 8338 | 16095748 ~ 16114424 (-) | True | LOC122346134 |
| XM_043239220.1 | mRNA | upstream | 27980 | 16115390 ~ 16138163 (-) | False | si:ch211-204c21.1 |
| XM_043239219.1 | mRNA | upstream | 27980 | 16115390 ~ 16138161 (-) | False | si:ch211-204c21.1 |
| TU54710 | other | downstream | 229010 | 15854934 ~ 15855808 (-) | True | cxcl11.1 |
| TU54705 | other | downstream | 237782 | 15846036 ~ 15847036 (-) | True | LOC122345695 |
| TU54668 | other | downstream | 356710 | 15726855 ~ 15728108 (-) | False | emc6 |
| TU54666 | other | downstream | 356908 | 15726782 ~ 15727910 (-) | False | emc6 |
| TU54865 | other | upstream | 166739 | 16254149 ~ 16256739 (-) | False | LOC122344710 |
| TU54936 | other | upstream | 289098 | 16376508 ~ 16378495 (-) | False | LOC122344728 |
| TU54976 | other | upstream | 509445 | 16596855 ~ 16633121 (-) | True | G37258 |
| TU54999 | other | upstream | 599850 | 16687260 ~ 16713167 (-) | True | G37277 |
| TU54996 | other | upstream | 600005 | 16687415 ~ 16713167 (-) | False | G37277 |
