RNA id: XM_043238611.1


Basic Information

Item Value
RNA id XM_043238611.1
length 2552
RNA type mRNA
GC content 0.47
exon number 19
gene id naaladl1
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10028474 ~ 10034404 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACAAATGACAACGCAGTGGTCCTCATCCATATGATCTTGACACTTGATTTTTCACACCCTCCTACCTACCAGCACTAATCACAGGCTATATTAGAGGAGGACAGAGCTGGTTGGACACATTCAGGAGGTGCACCGAGGTCTTTGGCAAACTAAAATTATGCTTAAGGAGGTGTTGTTGGGTGTCCTCATAGCAGCAGTGGCTTTGACTATAGGGATTCTGTTGGGACACTTCGCCATTGACAAGGGCAGTTCAGTGCCAGACTGGGCCCGGGATGCATCTCGTGATGTGGACGAAAGTATTATTGAGAAATTCCTCGCAGAACTGGATACAAATGAGCTTCGAGAGAACCTCAGGGAGCTGACTAAGGTTCCCCACATGGCCACCACTCCTGGAGATGAAGCAACTGTAGATTTTATGCTGAAGAGATGGCAGGACCCAAACACAGGCTTGGACAGTGCATGGAGGGAAGACTACAAGGtgtatctgtcattcccaaacAAAACAAGCCCCAACAAAGTGTCTGTTGttgatCAAGTTAACACGGTGCATTTTGAGgcaagagagcgagagaaggtATACACACCAGAACAGGAGGACCCAGAGGTGGTACAGCCATTCGCGGCATATTCCCCCGCAGGAAACGTCAAGGGAAAACTTGTCTATGCAAACCAAGGTAAAATGAGTGACTATGAGCATTTAAACAGAACGCTGGATCTAAGGGGAACTATCGCCATCACCAGATACGGAGGAGAAGGGAGATCTAAAAAAGCTATAAATGCAGCCAAGTTTGGAATCGTTGGGGTGCTGGTCTATACTGAACCGTATGACATGAACGATGGCCTGGTGTCCGAAAATGATACATACCCTCACTCCTGGTATCTCCCACCTTCTGGCGTTGAACGAGGCTCATACAATATTGACTTTGGAGACTTGTTAACACCTTACTTAGCTGCGAAGGaTGATACCTACAGAATACCAAAAGAAGACATAACAGGTATTCCACCAATTCCAGCACAGCCAATAGGTTATGAGGATGCTGAAAGATTAATCTGTGAGCTTGATGGGGACGAGGCCCCTAATAATTGGCAAGGCTCATTTAACTGCACATACAACCTTGGTGGGCCAGGGTTCAAAACCACATCTACCTTCAACAACAGCAATGTGCACTTGGACATTTATAACACTGAGAGGCTGGAATATTCAGCGAATGTTATGGGAATAATCCGAGGCAGTGTGGAGCCAGACAGGTACGTGATTTATGGGAACCACAGGGACAGCTGGGTGCATGGAGCCATTGACCCCAGCAGCGGCACAGCAGTGATGCTGGAAATCACCAGAGTGCTGGGGAAGATGGTGAAGGAAGGGAAATGGCGACCTCGGAGGTCCATTATCTTTGGCAGTTGGGGAGCTGAAGAATTTGGCCTTATTGGATCTGCAGAATACACAGAGGAGTACTTCAGTAAGCTGAGTGAACGCACAGTGGCATACATCAACGTGGACATCTCAGTGTTTGCTAATGCGACTCTCAGGGCTTCTGCTTCTCCAGCAGCACAGAGTGTGATATTCACAGCCTCCAAACAGGTAAAAGCACCTGGAACAACCACAACAGTTTATGAGAACTGGAAGCAATATTCCAACCGAACCAGCCCAAATTATGGAATTATACCAAATGTGGGCTTCTTGACAGGAGCAGGAAGTGATTATGCTGCATTTATGCACTATCTTGGAATAACGTCTATGGACATTTCCTATTATTATGACCGGAGCAAAACAAGAGCACGAATCTACCCGGCCTACCACACAGCTTACGACACTTTTGAGTACGCGTCTAAATACATTGACCCAGGATTCACAAGTCACCAGGCAGTAGCCAGGACAGCAGGGAATGTACTGCTGCGATTGGCTGACAGTCTTCTCCTGCCTTTCAACTGCAGTGACTATGCAGAGAGTCTGGAGCAGTACCTCAGTCAGGCGGTAACAGCCTTTGAGGAAAAACTTGGGGCTAATGGAATCTCTATGGAATCCTTGAAGAAAGCTGTGCAGTTATTCCGTGGCACAGCCACTAAACTGGACCGTTTGATTAGGGATTCAGATCTTGCAAAAGAAACGCCCCTGAAGGTCCGTCAAATGAATGACCAGCTCATGCTGCTGGACAGGGCTTTCCTTGACCCGCTAGCATTCCCGGAACAATATGGTTTCAGGCACGTGATATGGGCATCGAGGTCATCTAGCGTGCCCACCTTCCCCGGCCTAGCAGATGCAGTAGAAAAGGCTGAGAGCACCGGGCTGAAGGAAGACTGGGATCAGGCTCACAAACACATATCCATCGTCACACAGGCCATCGCAGGAGCTGCACACACACTGGATGATGTGATTTAATGCACAAAAGCAGaaatatgttactgttttcaCAAGTTTAATATTTCCGCTCTGAGAGTTGTTAAGCAGCCAaacgtaaaaaaattaaacgattTCTGGAGGAAGTAAATTATTATAACTACCATTCCCAGTAGATTCCTAGTGCACTATTAAACAAAAACCTGAAAACtta

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008233 peptidase activity molecular_function

KEGG:

id description
K01301 NAALAD; N-acetylated-alpha-linked acidic dipeptidase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU51347 lncRNA downstream 250236 9777633 ~ 9778238 (-) True G34877
TU51341 lncRNA downstream 261867 9766268 ~ 9766607 (-) True G34871
TU51339 lncRNA downstream 263942 9764073 ~ 9764532 (-) True G34869
TU51125 lncRNA downstream 780433 9246920 ~ 9248041 (-) True G34704
TU50983 lncRNA downstream 967660 9013306 ~ 9060814 (-) True G34594
TU51619 lncRNA upstream 247005 10281409 ~ 10296141 (-) True G35035
TU51637 lncRNA upstream 303343 10337747 ~ 10341167 (-) True G35047
TU51725 lncRNA upstream 344362 10378766 ~ 10378998 (-) True G35107
TU51762 lncRNA upstream 478526 10512930 ~ 10513285 (-) True G35139
TU51766 lncRNA upstream 482267 10516671 ~ 10517342 (-) True G35142
XM_043240807.1 mRNA downstream 167100 9843314 ~ 9861374 (-) False tango2
XM_043240806.1 mRNA downstream 167100 9843314 ~ 9861374 (-) True tango2
XM_043240109.1 mRNA downstream 187395 9831999 ~ 9841079 (-) True tmem150aa
XM_043240797.1 mRNA downstream 199434 9816868 ~ 9829040 (-) False si:ch211-102c2.8
XM_043240796.1 mRNA downstream 199435 9816868 ~ 9829039 (-) True si:ch211-102c2.8
XM_043238205.1 mRNA upstream 8130 10042534 ~ 10046774 (-) True gtf2h2
XM_043238206.1 mRNA upstream 8130 10042534 ~ 10046456 (-) False gtf2h2
XM_043239511.1 mRNA upstream 12494 10046898 ~ 10052562 (-) False oclnb
XM_043239512.1 mRNA upstream 12494 10046898 ~ 10052559 (-) False oclnb
XM_043239510.1 mRNA upstream 12494 10046898 ~ 10052558 (-) True oclnb
TU51236 other downstream 625851 9337828 ~ 9402623 (-) True G34789
TU51091 other downstream 807967 9215508 ~ 9220507 (-) False vamp5
TU50964 other downstream 1098421 8929470 ~ 8930053 (-) True G34580
TU50888 other downstream 1350756 8674549 ~ 8677718 (-) False LOC122345093
TU50638 other downstream 1596899 8429700 ~ 8431575 (-) True timm8b
XR_006251099.1 other upstream 290711 10325115 ~ 10335342 (-) False si:dkey-96l17.6
TU51745 other upstream 426804 10461208 ~ 10461709 (-) True G35122
TU52098 other upstream 833960 10868364 ~ 10874064 (-) True G35371
TU52116 other upstream 889523 10923927 ~ 10926163 (-) True G35384
TU52323 other upstream 1385551 11419955 ~ 11467122 (-) False hmgn7

Expression Profile