Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043238676.1 |
| length | 1890 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 5 |
| gene id | wnt11f2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056703.1 |
| NCBI id | CM032072.1 |
| chromosome length | 32833783 |
| location | 13376537 ~ 13379768 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0030100 | regulation of endocytosis | biological_process |
| GO:0060898 | eye field cell fate commitment involved in camera-type eye formation | biological_process |
| GO:0090037 | positive regulation of protein kinase C signaling | biological_process |
| GO:0035567 | non-canonical Wnt signaling pathway | biological_process |
| GO:0031016 | pancreas development | biological_process |
| GO:0030182 | neuron differentiation | biological_process |
| GO:0051496 | positive regulation of stress fiber assembly | biological_process |
| GO:0043066 | negative regulation of apoptotic process | biological_process |
| GO:0000132 | establishment of mitotic spindle orientation | biological_process |
| GO:0090090 | negative regulation of canonical Wnt signaling pathway | biological_process |
| GO:0001839 | neural plate morphogenesis | biological_process |
| GO:0045860 | positive regulation of protein kinase activity | biological_process |
| GO:0070121 | Kupffer's vesicle development | biological_process |
| GO:0045892 | negative regulation of transcription, DNA-templated | biological_process |
| GO:0045893 | positive regulation of transcription, DNA-templated | biological_process |
| GO:0030308 | negative regulation of cell growth | biological_process |
| GO:0060021 | roof of mouth development | biological_process |
| GO:0007417 | central nervous system development | biological_process |
| GO:0060031 | mediolateral intercalation | biological_process |
| GO:0030335 | positive regulation of cell migration | biological_process |
| GO:0030336 | negative regulation of cell migration | biological_process |
| GO:0034394 | protein localization to cell surface | biological_process |
| GO:0001947 | heart looping | biological_process |
| GO:0008078 | mesodermal cell migration | biological_process |
| GO:0061101 | neuroendocrine cell differentiation | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005109 | frizzled binding | molecular_function |
| GO:0030295 | protein kinase activator activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53205 | lncRNA | upstream | 52154 | 13324033 ~ 13324383 (+) | True | G36109 |
| XR_006251001.1 | lncRNA | upstream | 63885 | 13299755 ~ 13312652 (+) | True | LOC122345423 |
| TU53198 | lncRNA | upstream | 64152 | 13312061 ~ 13312385 (+) | False | LOC122345423 |
| TU53187 | lncRNA | upstream | 64845 | 13299809 ~ 13311692 (+) | False | LOC122345423 |
| TU53143 | lncRNA | upstream | 267684 | 13108632 ~ 13108853 (+) | True | G36062 |
| TU53255 | lncRNA | downstream | 140205 | 13519973 ~ 13521608 (+) | True | G36140 |
| TU53263 | lncRNA | downstream | 187209 | 13566977 ~ 13580798 (+) | True | G36141 |
| TU53304 | lncRNA | downstream | 268158 | 13647926 ~ 13648538 (+) | True | G36168 |
| TU53333 | lncRNA | downstream | 341017 | 13720785 ~ 13721566 (+) | True | G36191 |
| TU53340 | lncRNA | downstream | 352201 | 13731969 ~ 13732456 (+) | True | G36198 |
| XM_043240760.1 | mRNA | upstream | 4068 | 13342146 ~ 13372469 (+) | False | eda |
| XM_043240759.1 | mRNA | upstream | 4068 | 13342149 ~ 13372469 (+) | True | eda |
| XM_043240761.1 | mRNA | upstream | 4068 | 13342149 ~ 13372469 (+) | False | eda |
| XM_043238511.1 | mRNA | upstream | 38399 | 13334755 ~ 13338138 (+) | True | nalf2 |
| XM_043238327.1 | mRNA | upstream | 219300 | 13151621 ~ 13157237 (+) | True | steep1 |
| XM_043240075.1 | mRNA | downstream | 3444 | 13383212 ~ 13387955 (+) | True | igbp1 |
| XM_043240074.1 | mRNA | downstream | 3448 | 13383216 ~ 13387955 (+) | False | igbp1 |
| XM_043238691.1 | mRNA | downstream | 32852 | 13412620 ~ 13418968 (+) | True | micu2 |
| XM_043238689.1 | mRNA | downstream | 39588 | 13419356 ~ 13437936 (+) | True | nova1 |
| XM_043238690.1 | mRNA | downstream | 43067 | 13422835 ~ 13437936 (+) | False | nova1 |
| XR_006251084.1 | other | upstream | 569321 | 12803952 ~ 12807216 (+) | False | LOC122346073 |
| TU52846 | other | upstream | 671296 | 12703371 ~ 12705241 (+) | False | iscu |
| TU52818 | other | upstream | 860429 | 12514076 ~ 12516108 (+) | False | si:ch211-225b11.4 |
| TU52593 | other | upstream | 1120865 | 12249138 ~ 12255672 (+) | True | G35720 |
| TU53623 | other | downstream | 604329 | 13984097 ~ 13985706 (+) | True | ins |
| TU53776 | other | downstream | 910652 | 14290420 ~ 14292500 (+) | True | G36495 |
| XR_006250972.1 | other | downstream | 920275 | 14300043 ~ 14305304 (+) | True | LOC122345142 |
| XR_006250973.1 | other | downstream | 920275 | 14300043 ~ 14305304 (+) | False | LOC122345142 |
| TU54000 | other | downstream | 1267721 | 14647489 ~ 14651911 (+) | False | fgf5 |
