Item | Value |
---|---|
RNA id | XM_043238698.1 |
length | 1999 |
RNA type | mRNA |
GC content | 0.50 |
exon number | 3 |
gene id | spaw |
representative | True |
Item | Value |
---|---|
chromosome id | NC_056703.1 |
NCBI id | CM032072.1 |
chromosome length | 32833783 |
location | 27277047 ~ 27280391 (-) |
genome version | ASM1883169v1_2021_tiger_barb_Genome |
species | tiger barb (Puntius tetrazona) |
id | name | namespace |
---|---|---|
GO:0003140 | determination of left/right asymmetry in lateral mesoderm | biological_process |
GO:2000223 | regulation of BMP signaling pathway involved in heart jogging | biological_process |
GO:0060971 | embryonic heart tube left/right pattern formation | biological_process |
GO:0001947 | heart looping | biological_process |
GO:0035462 | determination of left/right asymmetry in diencephalon | biological_process |
GO:0035469 | determination of pancreatic left/right asymmetry | biological_process |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU59040 | lncRNA | downstream | 9818 | 27265289 ~ 27267229 (-) | True | G39888 |
TU59023 | lncRNA | downstream | 42885 | 27232658 ~ 27234162 (-) | True | G39872 |
TU59020 | lncRNA | downstream | 51485 | 27224887 ~ 27225562 (-) | True | G39870 |
TU59004 | lncRNA | downstream | 87825 | 27188850 ~ 27189222 (-) | True | G39857 |
XR_006250928.1 | lncRNA | downstream | 130085 | 27115967 ~ 27146962 (-) | True | LOC122344810 |
TU59046 | lncRNA | upstream | 4791 | 27285182 ~ 27286194 (-) | True | G39893 |
TU59120 | lncRNA | upstream | 258097 | 27538488 ~ 27538861 (-) | True | G39935 |
TU59121 | lncRNA | upstream | 258549 | 27538940 ~ 27539327 (-) | True | G39936 |
TU59154 | lncRNA | upstream | 370059 | 27650450 ~ 27650827 (-) | True | G39951 |
TU59171 | lncRNA | upstream | 468069 | 27748460 ~ 27789829 (-) | True | G39964 |
XM_043238359.1 | mRNA | downstream | 104153 | 27168265 ~ 27172894 (-) | True | LOC122344788 |
XM_043239545.1 | mRNA | downstream | 169668 | 27099855 ~ 27107379 (-) | False | LOC122345426 |
XM_043239544.1 | mRNA | downstream | 169670 | 27099855 ~ 27107377 (-) | False | LOC122345426 |
XM_043239542.1 | mRNA | downstream | 177328 | 27095380 ~ 27099719 (-) | True | LOC122345424 |
XM_043239546.1 | mRNA | downstream | 262549 | 27001647 ~ 27014498 (-) | True | LOC122345427 |
XM_043238696.1 | mRNA | upstream | 7781 | 27288172 ~ 27293486 (-) | True | usp39 |
XM_043238697.1 | mRNA | upstream | 21868 | 27302259 ~ 27308208 (-) | True | mat2ab |
XM_043239463.1 | mRNA | upstream | 32498 | 27312889 ~ 27334798 (-) | True | inpp5jb |
XM_043238855.1 | mRNA | upstream | 63099 | 27343490 ~ 27389998 (-) | True | smtnb |
XM_043238858.1 | mRNA | upstream | 63099 | 27343490 ~ 27389997 (-) | False | smtnb |
unassigned_transcript_1081 | other | downstream | 1165645 | 26111332 ~ 26111402 (-) | True | trnag-gcc_64 |
unassigned_transcript_1080 | other | downstream | 1167477 | 26109500 ~ 26109570 (-) | True | trnag-gcc_63 |
unassigned_transcript_1079 | other | downstream | 1175638 | 26101339 ~ 26101409 (-) | True | trnag-gcc_62 |
unassigned_transcript_1078 | other | downstream | 1185051 | 26091926 ~ 26091996 (-) | True | trnag-gcc_61 |
unassigned_transcript_1077 | other | downstream | 1187259 | 26089718 ~ 26089788 (-) | True | trnag-gcc_60 |
TU59072 | other | upstream | 102530 | 27382921 ~ 27398720 (-) | True | isca1 |
TU59237 | other | upstream | 608732 | 27889123 ~ 27895454 (-) | True | LOC122344874 |
TU59335 | other | upstream | 975437 | 28255828 ~ 28264704 (-) | True | G40080 |
TU59455 | other | upstream | 2180194 | 29460585 ~ 29490204 (-) | True | G40182 |
XR_006251000.1 | other | upstream | 2336608 | 29616999 ~ 29655061 (-) | False | eng |