RNA id: XM_043238705.1


Basic Information

Item Value
RNA id XM_043238705.1
length 3344
RNA type mRNA
GC content 0.45
exon number 19
gene id prkg2
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14706377 ~ 14717330 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggggcgtGTGAACGGTGCCGCTGACCGGGGCTCCTGCCTCAAACACACAACACTGTCTTTCAGCCATCGAAGAAGAGTTCCTGTATACGAAAACGGGAATTAAAGCTGTCATCTTTTACTGTCGAATAATAGTGCCAAAATGGGAAATGGATCGATGAAGCTGAACCCTCTAAAGCAGGTCAGTGGCTCCGCCAAATCTAAAAACAATGGAGAATCAAGCTCGGTTTCTCAGGTTCTCAGAGTTAGAGTGGAAGAACTGGAGAATCAACTGAAGAAAAAAGATGAAGACTTGAATGCCAAAGAGCTTCAGATCAAACATTTAGAGGAGCAACTGGCCCAGCAGAGGCAGACCATCTCAGAAATCTCGGACACTTTGAGGAACAAGTGTCTACAGCTCAACAAACTCCAGGATGCACTGAAGAATCAAGGAGAGCTAGGTCTCCTGCCATCACCTATTAAAGAAAAGGTCAGTCAGTGTCTCACTGGCCTGCTCAGAGATACTCTCAACAGAAGAAAAGGAGCAAAAGCTGGAGTGTCTGCAGAACCTTCATCTAGAACCTATGATTCCAGCGGTATACCAAAGTTCTACTTCGAGAGCGCACGAGTCTGGAAAGAACAAAGCGTAAAGAAGCTCCTCACGGATGCTTTGAATAAGAACCAGTATCTGAGAAGACTTGAAGTGCAACAGGTCAAAGACATGGTGGAATGCATGTATGAGAGAACGTACCATCAGGGAGAATACGTCATTAAACAAGGAGAGCAGGGAAACCACCTGTTTGTGCTTGCAGATGGCAAACTAGATGTCTATCAGCACAACAAACTGCTCACATCGATAGCGGTCTGGACCACATTCGGTGAATTAGCCATCTTGTACAATTGCACCAGGACTGCCTCAGTCAAAGCTGCCAGCAATGTGAAGACATGGGCCCTCGATCGAGAAGTTTTTCACAACATCATGCGGATGACTGCCGAGGCTCGACACGAGCAATACCGCAACTTCCTGAGGAGcgttTCACTTCTTGCCAGTCTACCTGGGGACAAACTAACTAAAATTGTGGACTGTTTAGAGGTGGAGTATTATAATAAAGGAGACTACATCATCCGGGAGGGAGAAGAAGGAAACACCTTTTACATAATTGCCAACGGAAAGATTAAagtcacacagagcacacagGACCACGAAGAGCCCCAGATCATCAACACCTTGGGGAAAGGGGATTATTTTGGAGAGAAGGCCCTCATCAGCGATGATGTCAGGTCTGCGAATATAATCGCAGATGAGGATGGCGTGGAATGCCTTGTCATCGATCGAGAAACCTTCACTCAGACTGTTGGGACTTTTGATGAGCTTAAAAAGTACCTCCAGAGCTATGTGGAGAATTTAACACGGGACGATAAGAAAAGAAATGCCAAGAGGTCAGGAAGCTGCACTCCTCCCACCACCCCAGTGTCACACGACATGATAgagctgaaagagagagagagcaactTTGCATCCACTATACCCTTCAGCTGCCTCGAGGTTATTGCCACGCTGGGAGTTGGAGGCTTTGGCAGAGTTGAACTGGTGAAAGTGAAGAACGAGAATGTGACGTTTGCTCTGAAATGCATCAAGAAACGGCACATCGTGGATAACAGACAGGAAGAACACATTTACTCCGAGAGGAGGATCTTGCTTGAGACAAACTCCCCTTTCATTGTGAAAATGTACCGCACTTTCAAAGACAACAAGTTCGTGTACATGCTGTTGGAGGCATGTTTGGGTGGAGAGATCTGGAGTCTTCTTAGGGACAGAGGGAATTTTGATGAATACACTGCCAAGTTCTGCGTGGGCTGCGTAACAGAGGCTTTTGACTACCTCCACAACAATGGCATCATATACAGAGACCTGAAGCCTGAGAATCTGATGCTGGACACAGACGGATACGTCAAGCTGGTGGATTTTGGCTTTGCTAAGAAGCTCAAGTGTGGCCAGAGGACCTGGACGTTTTGTGGGACTCCAGAGTATGTTGCACCTGAGATCATTCTCAATAAAGGTCACGGTCTCAGTGTGGACTTCTGGTCTCTTGGAATCCTGATCTTTGAACTTCTCACAGGAAGCCCACCCTTTACTGGCTCAGATCAGATGattatatacacattcattCTGAAAGGAATTGAGAAGATGGACTTCCCTAAAAAGATCACTAAGAGGCCCGGTGACCTTATTCGAAAGCTGTGCAGACAAAATCCTTCAGAGCGATTGGGGAATTTGAAGAATGGAATAACTGATATTAAAAAACACAGATGGTTTACAGGATTTAGCTGGAGTGGTCTGAAATCCAGAAGTCTAGTATCACCACTTAAAAGAGAGgTGAAAGGACCCACTGACCACAGTTTCTTTGACCGTTATCCTCCCGAGGAAGAAATCCCTCCAGATGAAATGTCGGGTTGGGACACAGATTTCTAACTGACCCCTCAGTGCACCCGTGTGTTCAAACAGTGTGAGTTAAACAAAACTCTTCTCCAACATGCCAGCCTTTCTTCCAAGGAACCTCAGACCATTAAGCCAACAGAAGCAGTGTATGTGCCGTAACAATGGACTCCTTGACCGGAGGCTGCTGTTAGTGCTGTGGGAGGCGCAGCAGAGGAGGACAGACATAAGAAGGGAATTGTTTCACCGTGTTCAGATATACTCATACATTGTGATGATAAACATTGATGTATTCGACTGAGTCTGTGAGAATGATGTAGCCGGGGGAACACAGGGGATGGTGAACCATTGGTAATATTTACCTTTAGAAGTGCAGAAGGGTTGGTGGTTTGGCAGGAAGGTGAGATGTTCCTTGTTTTAAAAGCGATGGTGATGTCACTTATTTGAAGGTAATAACCACCTGTGACTGTGAATGCCACTGACGAAGTTTTAAAGGTCTGATGAAGTCTCAGCGGGCGACTGGCCCTGCACTTTGCGCAATCCAAGCAGAGATATGTGAAAAGTAGTATTTTTAGTGACTTTTCCTAGAACTTCAGGTGACCACCGAACCTGAGCCAAATATGTTTGTGTTGATGTAATGTTCAGCGCTTGCTTATTTTATCCACGTGAATAGGACTTTTTTTTGTGCGAGAATTTAGATTTGCACGATTTTGTTCCCAGCACATCGCAAGTTCAGCCGTCGGTGCACACTAGTGATTTGTAAATGAGAATATCTATTAAATAATGGAGTTTGATGTTTGCGTGGTAACTTTCCAGTCCTTATTGACCCATTAAGCCAATTACATCATGTTCCATGATGCAACAgtctaaacatatttttgattgC

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0030553 cGMP binding molecular_function
GO:0004692 cGMP-dependent protein kinase activity molecular_function

KEGG:

id description
K19477 PRKG2; cGMP-dependent protein kinase 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU54076 lncRNA downstream 7424 14698736 ~ 14698953 (-) True G36696
TU54002 lncRNA downstream 53984 14652095 ~ 14652393 (-) True G36631
TU53966 lncRNA downstream 217649 14485814 ~ 14488728 (-) True G36602
XR_006250925.1 lncRNA downstream 238600 14464304 ~ 14467777 (-) True LOC122344807
XR_006250924.1 lncRNA downstream 240052 14464304 ~ 14466325 (-) False LOC122344807
TU54099 lncRNA upstream 163535 14880865 ~ 14881065 (-) True G36708
TU54112 lncRNA upstream 188055 14905385 ~ 14905621 (-) True G36714
TU54241 lncRNA upstream 451717 15169047 ~ 15169358 (-) True G36811
TU54472 lncRNA upstream 844392 15561722 ~ 15562078 (-) True G36967
TU54473 lncRNA upstream 844818 15562148 ~ 15562363 (-) True G36968
XM_043239516.1 mRNA downstream 89499 14573555 ~ 14616878 (-) True antxr2a
XM_043238385.1 mRNA downstream 205805 14493589 ~ 14500572 (-) True paqr3a
XM_043239122.1 mRNA downstream 359697 14334218 ~ 14346680 (-) False cnot6l
XM_043239121.1 mRNA downstream 359699 14334218 ~ 14346678 (-) True cnot6l
XM_043238974.1 mRNA downstream 406401 14293749 ~ 14299976 (-) False LOC122345141
XM_043238706.1 mRNA upstream 1194 14718524 ~ 14778259 (-) True rasgef1ba
XM_043238707.1 mRNA upstream 1194 14718524 ~ 14737308 (-) False rasgef1ba
XM_043239588.1 mRNA upstream 78019 14795349 ~ 14810245 (-) True cds1
XM_043240085.1 mRNA upstream 95227 14812557 ~ 14875477 (-) True wdfy3
XM_043240082.1 mRNA upstream 95227 14812557 ~ 14872326 (-) False wdfy3
TU53907 other downstream 403996 14292063 ~ 14302381 (-) True LOC122345141
XR_006250968.1 other downstream 649672 14045477 ~ 14056705 (-) False rnf214
XR_006250967.1 other downstream 649672 14045477 ~ 14056705 (-) True rnf214
XR_006251003.1 other downstream 696841 14001934 ~ 14009536 (-) False tmprss13b
XR_006251010.1 other upstream 488621 15205951 ~ 15264945 (-) False pdzd2
XR_006250970.1 other upstream 578688 15296018 ~ 15308440 (-) False zfr
XR_006251075.1 other upstream 632686 15350016 ~ 15367413 (-) False npr3
TU54482 other upstream 855781 15573111 ~ 15574817 (-) False alkbh2
TU54484 other upstream 855928 15573258 ~ 15574817 (-) False alkbh2

Expression Profile