RNA id: XM_043238785.1


Basic Information

Item Value
RNA id XM_043238785.1
length 3795
RNA type mRNA
GC content 0.49
exon number 16
gene id hnrnpul1l
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 21886007 ~ 21896079 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CAGCCGCTTCAGCCAATCAGCTGCAGGGACCGAGGGCGCTCAGGCAGCGGCGAGGCGGAGGAAGCGGGCAACCACGGTCACCCTCCATCTTCGATACCATCGTAACGACAGTTTGCTTGAGGGGGAAACTGACagaaaaagGCGCACAGTTTGGAATAAACTGCTGAAGGGGTGCATGAATCATGAGCGGGCTGAATGTCAAAAAGCTCAAAGTCAATGAGCTGAAGGAAGAGCTCCAGCGGCGAGGCCTGGACACCCGCGGGCTGAAGGCGGATCTGGCGGACCGATTGCAGGCGGCGCTGGAGGCCGAGGCGGCGGGGTCTGCGCCTTCGGACGAACAGGATCAAGACTACGAGGCTGGCGAGGAGCCGGGAGAGGGCAATGATTATCAGGAGGAAGAATTTGCAACCAGGGAGCAAGATTATGGAGAAGAGGCCAAGGCACAGTTTGATGATGGAAACAGCACAGACCTTTACCAGGGTGGATTTGATGATCAGGGAACGGAGAGTAACGAAGGCAACGAGGACAGCACCGAGACCCCCATACCTGGTTTTGGAACAAGTGATTATTCATCAGACGCGATGCCGGGACAGATGACAGAGCAGTACTCCTATGATCAGGATGAGTTCCCGGAGCCTCAGGCCAAGCAGCCGTACCCTGAGGAATCAGCCAGGCAGCACTATAAGCAGGACGAGGTGAAGCAGGAGTATGAGGAGACTGAGGCTGCACACGCAGAGCCAAAGGATGAGCAGAGACTCGACGAGCCAGAGACACGGGAGACCCCAGAAGGAGAGTCAAGTCAACGCAGCCAGCAGGAAGAGCCCGAGAGTTACGATGTGAAGACTGAGTTCAAGGGTGACGAGGATGTTCCACAGCGGGCTGAGCAGACGGGTGACTGGGATGCTCAGGCCAAATCAGAGGAGGATAGATACTCGTCATACAGTCGCAAGAGGTCATACGATGAGAGTCGAGGATACGGTTATTATGAACACCGTGAGGAAAGAAGAGGAAGATCACCACAGCCCCCagctgaagaagaagaggaagacaTTGATGATAAACTTGTGGTCATTGACACTTATAACTGTGACCTGCACTTCAAGGTGGCTCGTGACCGATACAGTGGTTACCCTCTGACCATTGAGGGTTTTGCCTACCTGTGGGCAGGTGCTCGAGCCACGTACGGTGTTACCAAAGGACGGGTGTGCTTCGAAATGAAGATAAATGAGGAAATTTCAGTAAAGCACCTTCCTTCATCTGAGCCTGACCCTCATGTGGTGAGAATCGGATGGTCCCTGGATTCTTGCAACACTCAACTTGGGGAAGAACCCTTCTCTTTCGGCTACGGAGGAACTGGCAAGAAATCCTCCAACTGTAAATTTGAAGACTATGGGGAAAAGTTCAGTGAAAATGATATCATTGGCtgctatattGACTTTGAAAGCAGTGAGCAAATAGAAATGGGATTCTCCAAGAATGGCAAGGAGCTGGGCCCATGTTTCCACGTCTCTCGAGAAGAACTGGCCGGCCGTGCTCTTTTCCCACATGTATTGGTGAAGAACTGTGCTGTAGAGTTCAACTTTGGACAGAGAGAGGAGCCCTTTTTCCCTCAGCCAGAGGGCTTCACCTTCATTCAGGATATTCACCTCGAGGAGAGAGTCAGAGGGACACTGGGACCTGCTACTAAAGCTGATTGCGAGATCCTGATGATGGTTGGTCTGCCTGGTAGTGGAAAAACAACCTGGGCCATAAAACACGCTAAAGAGAACCCTGACAAGAAGTACAACATCCTGGGCACAAATGCTATCATGGATAAGATGAAGGTAATGGGACTTCGTCGTCAGCGCAACTATGCCGGACGCTGGGACATACTTATTCAACAGGCCACACAGTGTCTCAACAGGCTTATCCAGATTGCTGCCCGGAAGAAGCGCAACTACATACTGGATCAGACAAATGTATATGGATCAGCCCAGAGACGAAAAATGCGTCCTTTTGAAGGTTTTCAACGCAAGGCTATTGTAATTTGTCCCACGGATGAGGATTTAAAAGAGCGAACGTTAAAGCGAACTGATGAGGAAGGGAAGGATGTTCCCGATCATGCTGTGTTAGAAATGAAAGCAAACTTTGTGCTGCCCGAAGTCGGCGAGTTCCTGGACGATGTGGCGTTCGTAGAGCTTCAGCGGGAAGAAGCCGACGCTCTCATCAAGCAGTACAACGAAGAAGGCCGTAAAGCCGGCCCTCCCCCAGAGAAGCGCTTTGATAGCCGCCAGGGTGGTTTCCGTGGCCGTAGTAACTTCCAGCGTTATGACAATCGTGGGGGAcctcagggtggcagaggtGGCTACCAGAACCGGGGCGGCTCTGGAGGCGGCGGCTACCGGGGAGGATACAACCGTGGAGGCTACAACCAGAATCGCTGGGGAAATAACTACAGGGATGGAGGAGGCTCTGGAGGTCGTGGTGGATACAATCGTAACCAGCAGTCTGGAGGCAATTACAACCACAACCGCCAGGGCTCCTACAACAAGAGTGGCTCTGGATCATCAGGAGGCTACAACCAATCACAGcCTCAGTCTTACAACCAAGGCTACAACCAGGGCTACAACCAGAGCAACTACAACCAAGGGTACAACTACGGCAACTACAGTCAATACCCAGGATACAACCAGAGCTACAGTCAAACTCCAGCGCCCACAGGACAGACCTAcaaccagcagcagcagagctACAATCAACAGTACCAGCAGTACGCTCAGCAGTGGCAGCAGTACTACCAGAACCAGAGCCAGTGGAACCAGTACTATAACCAATACGGCAGTTACGGCAACTATAACCAGCAGGGCACCCAAGGCAGCCAGGGCGCCCAGGGAACACAGTAGTAGCAGCACCGCAGCCGTACCAGACGGCCCATTCCCTAAGCAGCATTCctcatgccttttttttttttttggctcctTCTCTTACCCAgtcttacctttttttttttttttttttgcctgctcTCTGTAAACATTTATGCTCTCCCTATTTATGCCAACCTTAAAGGTAACCACATTTATGTGGCCCTCCATCGCTCCGTTTGAGTTTTGGTGAGAAGTATCCCTTTTTTGCTCTTCtactaaatatttgtttacatgcagcttgatctttttttttcctctgtgtaCTTGTAGATGAGAGGTTTGAACTTTGAATTTAGTAATATGTGGTTTAGTCTGCTGCGAACAGCTCTCACACTATGATGTGCTTGAATGTTTCAAAATAGAGCAGGAGAAATTTATTGAGAAAGCTTTGCACGCTTAGCTTTACATCTGATGTATGGAGCGAAAGAGAGGCAAGGTGTTTCTGTGTTCCAATAGTTTTaccactgattttattttattttttatcttgtaAGATTAAAGAACCACATTTTGCGGTAGATGGTTATGGGTATTGTTCTGTGTATGATCATATGCCTGTATGTACACATCGATGTAAGACCATGTAACACTTTTGTCTTGGTACATCATATTGGAAATTTTAATAACCTAAATCTTGAATAACACTTTTCTGATGTCTCAAGCCTTTGAAGGTtatcattttccttttttatataccatttttaaaatgactctgATTGGTCTGATACACATCTACTCCCAGATTTCTGATTAGTAACGATCCAAACTAGTTCCTTGTGTGGATATGTTTTTACCTTGTGTCTTGTCTGTAAAGCAGTATCTGCATATGGTTTTGTGTCAaatcaaaacacattattttgtatttgagaATATAATCAGATGAACCatc

Function

GO: NA

KEGG:

id description
K15047 HNRNPUL1, E1BAP5; heterogeneous nuclear ribonucleoprotein U-like protein 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU56992 lncRNA downstream 9422 21867615 ~ 21876585 (-) True G38523
TU56990 lncRNA downstream 18546 21867128 ~ 21867461 (-) True G38521
XR_006250963.1 lncRNA downstream 45907 21836313 ~ 21840100 (-) True LOC122345027
TU57036 lncRNA upstream 112807 22008886 ~ 22010107 (-) True G38543
XR_006250931.1 lncRNA upstream 142281 22038360 ~ 22041267 (-) False LOC122344815
XR_006250930.1 lncRNA upstream 142281 22038360 ~ 22041263 (-) True LOC122344815
TU57040 lncRNA upstream 142301 22038380 ~ 22041219 (-) False LOC122344815
TU57041 lncRNA upstream 142301 22038380 ~ 22041219 (-) False LOC122344815
XM_043238398.1 mRNA downstream 1985 21877081 ~ 21884022 (-) True LOC122344823
XM_043240559.1 mRNA downstream 18968 21856983 ~ 21867039 (-) False sympk
XM_043240555.1 mRNA downstream 18968 21856983 ~ 21867039 (-) False sympk
XM_043240556.1 mRNA downstream 18968 21856983 ~ 21867039 (-) True sympk
XM_043240558.1 mRNA downstream 19160 21856983 ~ 21866847 (-) False sympk
XM_043238440.1 mRNA upstream 13695 21909774 ~ 21922073 (-) True LOC122344852
XM_043239243.1 mRNA upstream 29419 21925498 ~ 21953026 (-) False ap2b1
XM_043239242.1 mRNA upstream 29419 21925498 ~ 21953026 (-) True ap2b1
XM_043240128.1 mRNA upstream 65351 21961430 ~ 21967136 (-) False orai2
XM_043240127.1 mRNA upstream 65351 21961430 ~ 21967126 (-) True orai2
XR_006250934.1 other downstream 1985 21878156 ~ 21884022 (-) False LOC122344823
XR_006250933.1 other downstream 1985 21878156 ~ 21884022 (-) False LOC122344823
XR_006251046.1 other downstream 59902 21809013 ~ 21826105 (-) False akap10
TU56743 other downstream 266424 21612688 ~ 21619583 (-) True G38355
TU56747 other downstream 516959 21364238 ~ 21369048 (-) True G38359
XR_006251116.1 other upstream 63706 21959785 ~ 21959884 (-) True LOC122346220
XR_006251119.1 other upstream 143822 22039901 ~ 22040034 (-) True LOC122346224
TU57575 other upstream 1706165 23602244 ~ 23604733 (-) False LOC122345364
TU57636 other upstream 1855801 23751880 ~ 23756588 (-) True G38917
TU57720 other upstream 1991224 23887303 ~ 23887680 (-) True G38973

Expression Profile