RNA id: XM_043238806.1


Basic Information

Item Value
RNA id XM_043238806.1
length 1776
RNA type mRNA
GC content 0.45
exon number 10
gene id riok2
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15530074 ~ 15534492 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCACACTGCGCACTTCCGGTTTGAACATGTGGAATGGGGATGGCAGGTTGAACTAGTCACgcattacaaaaaacatttgggggaaaaaaattagcTTACTAATTTTCAGAAGATTTCTACGTGTTTGCCACCATGGGCAAATTAAACGTTGTTATCTTGAGGTATCTGTCCAGGGAGGATTTTAGAGTCCTCACAGCGGTGGAAATGGGCATGAAGAACCACGAGATCGTTCCAGTAAGTCTGGTCGCGTCTATTGCCAGCCTCAAACATGGAGGGTGTAACAAGGTTTTGCGGGAGCTGGTCAAACACAAACTACTGGCCTACGAACgcagcaaaaCTGTGCAGGGCTATCGGTTGAATTACGGCGGCTATGATTACCTGGCACTGAAGACATTTTCATCCAGAGATATTATTTTGTCAGTAGGAAACCAGATGGGAGTCGGCAAAGAGTCAGATATTTACATTGTCGCAAATGCTGAGGGGGAGCAGTTTGCTCTGAAACTTCACAGACTGGGTCGGACATCCTTCAGGAACTTAAAGAACAAGAGAGATTACCACAAGCACAGACACAAGATGTCGTGGCTGTACCTGTCCCGGCTTTCCGCCATGAAAGAGTTTGCATACATGAAGGCATTATATGATCGAGGGTTTCCTGTTCCAAAGCCAGTAGACTACAACAGACATGCAGTAGTTATGGAGCTTATTAATGGTTACCCACTGTGTCAGGTTCGAGAAATTCAAGACCCTGCTGCATTGTACAGTGAAATCATGGAGCTAATAGTCAAACTTGCCAACCATGGGCTTATCCATGGTGACTTCAATGAATTTAACCTCATGCTTGATGACAACGACCACGTCACAATGATCGACTTCCCTCAGATGGTCTCCACCTCACACACAAATGCAGAATGGTACTTTGATCGAGATGTTAAGTGTGTTCGAGATTTCTTCTTGAAAAGATACAACTATGAAAGCGAACTCTATCCAACATTCAAAGATATCAGAAGAGCCCACTCGCTCGATGTGGAGATCTCAGCTAGTGGCTACACCAAGGAGCTGCAGCAGGATGACCGTTTGCTCCACCCTGAAGGTCCAGAGGGTGAAGAACTCAGTGGAGATGAAGATGACATCTCGGAGTCGGTTGACGATACGCATCAGGCTGCCTCAGAAGACGTTATCAGCATAGAGGAGTATAAACAAGCCATGCTTGAACTGGAAGGGCTAAATATTAGTAAAGATACTCCAACAGAAGAGAACAAAACAGAGGAACCTAAAGGAGCTCAAGGTGAAGAGGAGCTTCCCTCAGAGGACATTCAAAAAGAAACTGTTTGCAACATTACCACAGATTTGGAGAGGGAAGAGGAGAATGAGGTGGAGGATGAGTGTCCTGATTTGGTTGACCTTTCTTCAGCCAACAAAGAGTTTAGGCCATTCAGAGACCAAGTGAGCCTTGAGAATGAGCACAGGAGGAGAACAACCAGTGAAATGAGCATTGGAAGTGTTGGCAGTTGTTCTACTATACCACCAGAGGTCATCAGGCAGAAAGTGAAGAGACAGCTCACGAAACAGCAGAAGGCTGCTCAGAGAAGACGTTTACAGAAGGGTGAAGCCAACCTGGTGACCAAGGAGAGGAGAGAAAATCAGAACAACATCAAGAGCAGTTTGGAGGGGGCTTACTTCTGGGGCTGAGGGTGGTCCTGAAATCTGTTGAGGACTTCTAACATTTTTCAGAGTTGCTTCTTTATCTATGGAAGTACTAATAAAAAACTTAATCCC

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K07179 RIOK2; RIO kinase 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU54241 lncRNA downstream 360716 15169047 ~ 15169358 (-) True G36811
TU54112 lncRNA downstream 624453 14905385 ~ 14905621 (-) True G36714
TU54099 lncRNA downstream 649009 14880865 ~ 14881065 (-) True G36708
TU54076 lncRNA downstream 831121 14698736 ~ 14698953 (-) True G36696
TU54002 lncRNA downstream 877681 14652095 ~ 14652393 (-) True G36631
TU54472 lncRNA upstream 27230 15561722 ~ 15562078 (-) True G36967
TU54473 lncRNA upstream 27656 15562148 ~ 15562363 (-) True G36968
TU54475 lncRNA upstream 29606 15564098 ~ 15565262 (-) True G36969
TU54502 lncRNA upstream 169260 15703752 ~ 15709388 (-) False cenpv
TU54544 lncRNA upstream 179183 15713675 ~ 15713975 (-) True G36986
XM_043239504.1 mRNA downstream 728 15505966 ~ 15529346 (-) True epg5
XM_043240356.1 mRNA downstream 36404 15480180 ~ 15493670 (-) False dnajb5
XM_043240355.1 mRNA downstream 36480 15480180 ~ 15493594 (-) False dnajb5
XM_043240354.1 mRNA downstream 37050 15480180 ~ 15493024 (-) True dnajb5
XM_043239300.1 mRNA downstream 53001 15472092 ~ 15477073 (-) False akr1a1a
XM_043238805.1 mRNA upstream 202 15534694 ~ 15554686 (-) False atxn2
XM_043238802.1 mRNA upstream 202 15534694 ~ 15554686 (-) False atxn2
XM_043238801.1 mRNA upstream 202 15534694 ~ 15554686 (-) False atxn2
XM_043238799.1 mRNA upstream 202 15534694 ~ 15554686 (-) False atxn2
XM_043238803.1 mRNA upstream 202 15534694 ~ 15554686 (-) False atxn2
XR_006251075.1 other downstream 162661 15350016 ~ 15367413 (-) False npr3
XR_006250970.1 other downstream 221634 15296018 ~ 15308440 (-) False zfr
XR_006251010.1 other downstream 265129 15205951 ~ 15264945 (-) False pdzd2
TU53907 other downstream 1227693 14292063 ~ 14302381 (-) True LOC122345141
XR_006250967.1 other downstream 1473369 14045477 ~ 14056705 (-) True rnf214
TU54482 other upstream 38619 15573111 ~ 15574817 (-) False alkbh2
TU54484 other upstream 38766 15573258 ~ 15574817 (-) False alkbh2
TU54499 other upstream 169260 15703752 ~ 15709388 (-) True cenpv
TU54667 other upstream 190535 15725027 ~ 15727910 (-) True emc6
TU54666 other upstream 192290 15726782 ~ 15727910 (-) False emc6

Expression Profile