RNA id: XM_043238872.1


Basic Information

Item Value
RNA id XM_043238872.1
length 2196
RNA type mRNA
GC content 0.44
exon number 3
gene id agtr2
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11337866 ~ 11345096 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCCGCCCCAATGAAGATTTGAAGAAAGAACTCACGCCTAAATTGGACTGTCAGAAACCGATAAGACTTTGAGTTTTATGGACGTCGCCATATTTGATATTACTTCGATCACTGTCGCAGTTTGGCTGACATTTCGGGACTATAAAACAATGCAAGCTTATGTTTCTCTATGGCTCCGAAACCTACAGATGTCCGAGTTCCACTCTCTATGCAACTGATACTCGACTGCCACTGGCTCATTTGCGTTCGAGGGGAGGGGCTTACCGACAGACCAGTTTTAAGGATGGACAAATGTGGACGTAAAAATATTGTAGCAAATCCTACATCTGGTTGGCTGTTTACTCCCTCATATACTTACACATGCAGAGAATTGTCTCCACTTCCAAAATGGAAAAGTCTGCTGGGGGTTAAGCAAGCTTTCTTTGGCTCGGTTTTCAGCGTGAAACGTGCGCCAGGGGTTTAGTGACACCTCGAAGAGACCGAAGACTTTTTCACAGGAAACTGAAAGaACTTTCTCATTCCTGAACCATCCTGCATAATCAACGCCATGGAAACAGAATCCACCTTTAACTTGACTGCACCCACTGTGTCTTCGTTGCACCAAAACACGACGAACTCTTGCGACTACATATCCACCTCAGCCTCGCAGTACCAGAAGAAAGTGATCCCAACTTTGTACAGCCTAATTTTCCTGCTAGGTTTTCTTGGTAACATGCTGGTGGTGTGCGTGCTAAATCACAGTTCAGGCCGAAGGACGGTAGCCAACACGTATCTGATGAATCTAGCCATGTCGGACTTGCTGTTCCTGAGCTCTTTGCCATTCTGGGCTGTTTACTATTCGCTGGATTACAACTGGGTTTTTGGAAAGGTCATGTGCAAGCTGTGTGGAGGTCTGGTAACTATAAACGTCTACGCTAGTATATTTTTCATCACGTGTATGAGCGTGGATCGATATCATGCCATCGTCCACCCATTGCACTCTCAGAGCAGCCGGAGCATAAATCAGGCCAGATGTGTCAGCGGCATCATTTGGGTCGTGGCGGCTTTGACGACATTGCCGACAGTTGTGTTTCGTGACATACACACTTTCCCCAGTAACAACATTACGGCATGTGTCATTAATTTCCCCAGCGCCAACTGGCAAACCTGGTTAACTCTTGGGAAGAACACTCTGGGATTCTTCTTGCCATTTGTTGTCATTGCAACCTGCTACGGCCGAATCGCCGTAAACCTTCTGGCCACCCCGAACTACCTGGAGCCGGACTCCACCCGACTGGTCCACGTGTTGCGTATGGTGGTAGCTGTGGTGCTGGCGTTTTTCTTTTGCTGGTTTCCGTTTCACGTTCTGGCGTTCCTCGGGGCTCTGGGGGAGCTGGTTGTGGAGTGGGATTGCTGGGTGCTTCAAGCGATCCATAAACTGCTCCCGTTCTTCCTGTGCCTCGGCTTTTCCAACTCTGCCATAAACCCCTTCCTGTACTGTTTTGTGGGAAATCACTTCCGAGAGAAGCTGTGGCAGTTTTACGGGGACATGCTGACGCAGAAAAGGGATTCCATCAGCACGAGACTATCTTCCTTCTCCAGGAAACTGAGTGACCTCAAAGAAACCGTGCCTATGGAGATTCTTGAGCAGCAGAACAGCCCTTAGTGGAATCTGATCAATCTACACCTTTacatactattattataatgcagAAGACCATGCCAAGTGCTTTTCCATGGACTGCTATCTGTTTGAGATGATCAGTTATGATTGTTGTTGGTTGCTATAATTGGGGTTGTGTCACTGTGCCTTGCTTCTAATTACGCAATGATTGTGAATAGCGCCAGCATCTATAAACAACATTTGGTTACATAACAATGTGTAGAAATATAGTCCACATATTATTCTTTGATCAGACTTTATACAGGATgaggaatttgctgattttctgcaCAAATCATagataagaaataaataagataaaacgTCTTAATATTTGGATTATTGGTAATATCAGAGTAAATAACACTCAAATGTTAGTGTTAATCATGTCTTTCATATGCCTGAAAGCTGCCAGACAgactaaaactataaactgtAATATACAAAGTCACAAAGCTGTAATATACAATGTAACATGAGCtgttaaaaatcattgtaaatTGAATTATAGTTCTATGATAAAGGAGCATCATCAATAAATGATGTTTGCAAGTA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004945 angiotensin type II receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU52196 lncRNA downstream 7500 11304281 ~ 11330366 (-) False G35434
TU52195 lncRNA downstream 7500 11324745 ~ 11330366 (-) True G35434
TU52305 lncRNA downstream 25036 11311549 ~ 11312830 (-) True G35522
TU52216 lncRNA downstream 87860 11249199 ~ 11250006 (-) True G35450
TU52278 lncRNA downstream 116975 11219968 ~ 11220891 (-) True G35499
TU52399 lncRNA upstream 325959 11670957 ~ 11674817 (-) True G35592
TU52405 lncRNA upstream 347552 11692550 ~ 11694947 (-) True G35594
TU52415 lncRNA upstream 351193 11696191 ~ 11697674 (-) True G35597
TU52417 lncRNA upstream 352950 11697948 ~ 11699666 (-) True G35599
TU52418 lncRNA upstream 352950 11697948 ~ 11699511 (-) False G35599
XM_043238869.1 mRNA downstream 1765 11330989 ~ 11336101 (-) True si:dkey-125i10.3
XM_043239781.1 mRNA downstream 128425 11204478 ~ 11209441 (-) False kat5a
XM_043239782.1 mRNA downstream 128426 11204478 ~ 11209440 (-) False kat5a
XM_043239780.1 mRNA downstream 128426 11204478 ~ 11209440 (-) True kat5a
XM_043238517.1 mRNA downstream 142027 11193469 ~ 11195839 (-) True gjb1a
XM_043238868.1 mRNA upstream 3630 11348628 ~ 11361935 (-) False tpcn1
XM_043238866.1 mRNA upstream 3630 11348628 ~ 11361935 (-) False tpcn1
XM_043238865.1 mRNA upstream 3630 11348628 ~ 11360841 (-) False tpcn1
XM_043238867.1 mRNA upstream 3630 11348628 ~ 11360649 (-) False tpcn1
XM_043238864.1 mRNA upstream 3630 11348628 ~ 11360649 (-) True tpcn1
TU52116 other downstream 411703 10923927 ~ 10926163 (-) True G35384
TU52098 other downstream 463802 10868364 ~ 10874064 (-) True G35371
TU51745 other downstream 876157 10461208 ~ 10461709 (-) True G35122
XR_006251099.1 other downstream 1002524 10325115 ~ 10335342 (-) False si:dkey-96l17.6
TU51236 other downstream 1935243 9337828 ~ 9402623 (-) True G34789
TU52323 other upstream 74957 11419955 ~ 11467122 (-) False hmgn7
TU52322 other upstream 118833 11463831 ~ 11467122 (-) True hmgn7
TU52344 other upstream 238782 11583780 ~ 11652627 (-) True G35554
TU52507 other upstream 456316 11801314 ~ 11815810 (-) False msna
TU52701 other upstream 820412 12165410 ~ 12169327 (-) False sh2d1aa

Expression Profile