Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043238965.1 |
| length | 1272 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 6 |
| gene id | ranbp1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056703.1 |
| NCBI id | CM032072.1 |
| chromosome length | 32833783 |
| location | 5430566 ~ 5435131 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0046907 | intracellular transport | biological_process |
| id | description |
|---|---|
| K15306 | RANBP1; Ran-binding protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006251035.1 | lncRNA | downstream | 261317 | 5142578 ~ 5169249 (-) | False | LOC122345808 |
| XR_006251034.1 | lncRNA | downstream | 261317 | 5142578 ~ 5169249 (-) | True | LOC122345808 |
| XR_006251036.1 | lncRNA | downstream | 261317 | 5146350 ~ 5169249 (-) | False | LOC122345808 |
| TU49076 | lncRNA | downstream | 354532 | 5075761 ~ 5076034 (-) | True | G33334 |
| TU49075 | lncRNA | downstream | 376663 | 5034111 ~ 5053903 (-) | True | G33333 |
| XR_006250957.1 | lncRNA | upstream | 139033 | 5574164 ~ 5597629 (-) | True | LOC122344984 |
| TU49160 | lncRNA | upstream | 147012 | 5582143 ~ 5584600 (-) | False | LOC122344984 |
| TU49165 | lncRNA | upstream | 152914 | 5588045 ~ 5589905 (-) | False | LOC122344983 |
| TU49166 | lncRNA | upstream | 152914 | 5588045 ~ 5595174 (-) | True | LOC122344983 |
| XR_006250956.1 | lncRNA | upstream | 153796 | 5588927 ~ 5595020 (-) | False | LOC122344983 |
| XM_043239633.1 | mRNA | downstream | 1098 | 5412669 ~ 5429468 (-) | False | golga3 |
| XM_043239632.1 | mRNA | downstream | 1098 | 5412669 ~ 5429468 (-) | True | golga3 |
| XM_043238769.1 | mRNA | downstream | 20072 | 5398894 ~ 5410494 (-) | True | ankle2 |
| XM_043238768.1 | mRNA | downstream | 21452 | 5398894 ~ 5409114 (-) | False | ankle2 |
| XM_043238772.1 | mRNA | downstream | 36937 | 5388819 ~ 5393629 (-) | False | poli |
| XM_043238962.1 | mRNA | upstream | 846 | 5435977 ~ 5454756 (-) | False | LOC122345133 |
| XM_043238964.1 | mRNA | upstream | 846 | 5435977 ~ 5454756 (-) | False | LOC122345133 |
| XM_043238959.1 | mRNA | upstream | 846 | 5435977 ~ 5454756 (-) | True | LOC122345133 |
| XM_043238960.1 | mRNA | upstream | 846 | 5435977 ~ 5449196 (-) | False | LOC122345133 |
| XM_043238961.1 | mRNA | upstream | 846 | 5435977 ~ 5448890 (-) | False | LOC122345133 |
| TU48850 | other | downstream | 807508 | 4622490 ~ 4623058 (-) | True | G33175 |
| TU48820 | other | downstream | 1237485 | 4144927 ~ 4193081 (-) | True | LOC122346168 |
| TU48822 | other | downstream | 1237485 | 4144927 ~ 4193081 (-) | False | LOC122346168 |
| TU48823 | other | downstream | 1237485 | 4144927 ~ 4193081 (-) | False | LOC122346168 |
| TU48804 | other | downstream | 1536091 | 3885550 ~ 3894475 (-) | False | piwil2 |
| unassigned_transcript_954 | other | upstream | 521168 | 5956299 ~ 5956371 (-) | True | trnak-uuu_104 |
| TU49743 | other | upstream | 1389040 | 6824171 ~ 6826182 (-) | True | G33758 |
| XR_006251011.1 | other | upstream | 1488299 | 6923430 ~ 6943192 (-) | True | usp20 |
| XR_006251012.1 | other | upstream | 1495741 | 6930872 ~ 6943203 (-) | False | usp20 |
| XR_006251117.1 | other | upstream | 1686591 | 7121722 ~ 7121849 (-) | True | LOC122346221 |
