RNA id: XM_043238992.1


Basic Information

Item Value
RNA id XM_043238992.1
length 2566
RNA type mRNA
GC content 0.45
exon number 21
gene id fkbp15a
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7134078 ~ 7141495 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

cttttgttaaaaatgagtTCTACATTACATACTTTTATATGCATCATGGatcagcattttaattttattcataattgttttaaaaatacgaTATTTCTGTAACAAAGCTGCAGTTCAATCGCTGACCCACGGGAGCCTCCATATCATCCCCTATCTTTCACACTCGACCCGTCACGTGCTCGCGCGCGTGCGCGTGCCAGCCGCCGTGTCCTCGCGCTTACCTGTGCTCATCATATCGCGCGAGCGCAGAGTATTTGTATATTCACTGAAGCCAGTTAACAGTACTCAAAAACTGTAGTATGGAAAAAGTTAAAGACGTTATTCCTGATTATAACGAtgaagactttctgtgtcctaAAAGTGGGGCAAAGTTGGCCTCTCTCTTTGGTCTGGACCGAGCAGAGAGTCAGGGAAATGAGTCCTTTCAATTCACCGCCCCTAAACAGCCAAAAAAGTCCTGCGCCGTATTAGGCCCGCCTCCCCAGAAGTCCGTCCCTCCTCCCTGCGCTCCAGCTGTGCTGTTTGCTACAGCTGTTCATGCATTCAGCTTTGTGAATGGACAGTATGTAAAGCAAGGCAAGATAGGAGCTGCTGTTTTAGGAAACCATGTCTCCAAAGAGTACAAGATTCTTTTATACACCAATAAACAAAAGCAGATCAGCGCGGCTCGAATCCATCGTGGATTTGTCCTTACAGTTCAGCCTTGTAACTATGTCACTTTCTATGATGACCAGCAACAAAACTGGTCTTTAATGTTTGACTCGGCAAGGTCCAGGTCTGAGTTCTGTAAGGAgGTGTGCGTGGCTCGGTGGAACAGTGAGGCTTCGTCAGACTCTCTGGTCACTCAGGACCTGGTCCAAGGAGAAGGTCAAGCTGTTGATGTCGGGGACACAGTGGAGGTGGCCTATTCTGGATGGCTTTTACAGAACCATTCTCTGGGACAGGCGTTTGAATCCAATTTAGGCAAAGAAAAGCTGCTGCGAGTGAAGCTTGGGTCGGGAAAAGCTCAGAAGGGATGGGAGGACGGGATGCTTGGCATGCAGAAAGGAGGTCGACGGCTCCTTATCGTCCCTCCTAGTATAGGTCATGGGTCAAAGGTCATCCTTAACCATGTGCCAGCAAACAGCACTCTGGTGTTTGAGGTTGAGATTCATAGAGTTAAATTTTCCAAAGGCAGACATAGCCAGGCATCATTTGACACCTCAAGGGCATCCCCAAGCACCTGTTCAGACTCTCAGACTGAAGACAGCACTAGCCAATCAGTCGCCGATACAGATAAGTCAAAAGTCCAAGAACCTAAGGGGAACGTGGCATCTGTATCTCTGACAAGTTCAGGTGCTTCCAAATCTAAAATAATCTCACGTATAGCCAAGATGGGTCAGCCAATGCTTCCCTTTCTCACTGGGGCCATTCCGGCTCAGCCTGACCCCAGCGACTCGGAAACAGAGGATACCAGTGGAGTTATTTGTGATCCCACTCCTTCACACTCCCCCAAACTTGCACCAATGCCCTGCaCGTCGTATCCGCCTGACGATGCTCAGAAACAGGAAGCCGTGCCTCCAGAAGGAGACTTAAACACTACTCAAGGCTTTCAGCAATATTCCTTCAGACAAAATCCTTATTTTCCAACACAGCTGGATTCATTTGCCTCAGTCTACCCATCCCAGCACATCCCATACCAAACCCCTGATATTACATCATTCCTGATGTCTGACGCTCGCCGACACAACACAGAAATTCTGCTGGCTATTGAAAAGCTGGCACGCAGAGTGGACCAGCTGACCTGCAAGgttgATGATCTGCAAAAAGAGGGTAACTTCTCTTTCAGACTGTCCTCTGCATCCTTAGAGACAAACGTGATCCTACAAAACATTCAAAGAATTATTCAGgagagTATGTGTCTGAAAAAGGAGGTTCTGGAGAGGAGTTCTCAGGTGGAGGAAGAGAATCACAAAACAGAGAGGAATAAGAGGTATATGGAGCAGCAAGACAATCAGACTTCCCCCCAACAGACCGAGCAGGAAAAGGTAAAACAACTGCTGAATGAAGTGTTCGAGTctctcaggacagagtttgattCACAGGAATCTTACAGCGGACACGCGGTGCTTGAGATTCTCCAAAAAACCATCAAGAGTATCTCCGTGAAGCTTCTCTCGGACCCATGGGAACTGGAATCAGGCGTAGAGGAAGATGAGGTAGAGGAAGAGCATTTGCGAATCAGAAACACGGAGAAGGAAGACCTTAAAAAGGAAGCATTTATGCTAACAGAACAAATGTAGATATTGCAGCATCATCGGCTGTTCGCATACTGAATGGGGAATTGCTACCGTCCTCATCACGTCTCAGTGTTTCAGAGCAGGCAGTTTTTCAGGGAAGAACACAGATATGGCTGGATATGCCTAACAAGTTTAAATCAAGTTAACTAGATACACAAAACTAATCTTTACTgcagttttctttgaaaaaattatttaatatagtatttacgttttatttataattttaaaaaattgcaaaatcAAGACTAACCGAATCGACttgtgcattaatattaatttattaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU49823 lncRNA downstream 82754 7050977 ~ 7051324 (-) True G33816
TU49781 lncRNA downstream 134694 6998360 ~ 6999384 (-) True G33788
TU49818 lncRNA downstream 145306 6988026 ~ 6988772 (-) True G33811
TU49817 lncRNA downstream 147859 6986000 ~ 6986219 (-) True G33810
TU49816 lncRNA downstream 150205 6982426 ~ 6983873 (-) True G33809
TU50023 lncRNA upstream 52481 7193976 ~ 7194213 (-) True G33947
TU50064 lncRNA upstream 192919 7334414 ~ 7336545 (-) True G33985
TU50073 lncRNA upstream 224755 7366250 ~ 7395232 (-) True G33990
XR_006251018.1 lncRNA upstream 308882 7450377 ~ 7460111 (-) False LOC122345654
XR_006251019.1 lncRNA upstream 308882 7450377 ~ 7460111 (-) True LOC122345654
XM_043238989.1 mRNA downstream 10080 7121409 ~ 7123998 (-) True rpl12
XM_043238990.1 mRNA downstream 10205 7121409 ~ 7123873 (-) False rpl12
XM_043238628.1 mRNA downstream 24246 7105673 ~ 7109832 (-) True ccn1l1
XM_043240920.1 mRNA downstream 31347 7091366 ~ 7102731 (-) False lmo4a
XM_043240919.1 mRNA downstream 31349 7090165 ~ 7102729 (-) True lmo4a
XM_043240178.1 mRNA upstream 134 7141629 ~ 7148537 (-) False crata
XM_043240177.1 mRNA upstream 134 7141629 ~ 7148537 (-) True crata
XM_043239709.1 mRNA upstream 15999 7157494 ~ 7162360 (-) True ier5l
XM_043240191.1 mRNA upstream 138950 7280445 ~ 7286031 (-) True ndor1
XM_043240529.1 mRNA upstream 198717 7340212 ~ 7344137 (-) True c9
XR_006251118.1 other downstream 11614 7122339 ~ 7122464 (-) True LOC122346223
XR_006251117.1 other downstream 12229 7121722 ~ 7121849 (-) True LOC122346221
XR_006251012.1 other downstream 190875 6930872 ~ 6943203 (-) False usp20
XR_006251011.1 other downstream 190886 6923430 ~ 6943192 (-) True usp20
TU49743 other downstream 307896 6824171 ~ 6826182 (-) True G33758
TU50081 other upstream 240851 7382346 ~ 7397153 (-) True G33998
TU50440 other upstream 578201 7719696 ~ 7721463 (-) False si:dkey-220k22.3
TU50633 other upstream 1270387 8411882 ~ 8414806 (-) True G34372
TU50638 other upstream 1288205 8429700 ~ 8431575 (-) True timm8b
TU50888 other upstream 1533054 8674549 ~ 8677718 (-) False LOC122345093

Expression Profile