RNA id: XM_043239032.1


Basic Information

Item Value
RNA id XM_043239032.1
length 1803
RNA type mRNA
GC content 0.47
exon number 14
gene id ak8
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 8611512 ~ 8631326 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGTTACCAATGGCAACAAACAGCAACAAACGCATGCGCGCGACAAActagcaacaacaaaaaacggCACAAGCCAAGTTATTGACAGATTTCCCAGTCTCTGGTGAGCTTTCTGTGGACAGGACAATGATGGATGCGACGGTACGGCCCCTCAGAATCCCACCTGAAATGGCCATTTATGCGGAGAAACATGACATATTTCACCTGGTCCAGACACTAGTGAGAAATTTGATGGTGGACAAACCAGAGGACCCCATTCAACACCTGATTAACTTCTTGAAAAGAGACAGTGTTgtGCCAAGAATCATATTGATAGGTCCTCCAGCATCTGGGAAAAGAACCATAGCTAAAAAGTTGTGTGAGCACATACAGGCTATTCACATAACTTTTAGCGATATCTTAAAGGATGACAGCGACTTAAGCAGAGCTGCACAGCAGTACCAAGACAAAAAACAGAAGATCCCCAAAGACCACTGGAGACAGTTGATTCAGCAGCGCCTGTCAAAACCGGACTGCCTTCGACGGGGCTGGGTTTTGGAAGCCATTCCCAAGACGCAAGAAGAGGCACTATGTCTACAAGAAGCAGGAATCAGCCCCGATCATGTTGTGATGCTGGAAGCTCCTGATGTCATTCTGATTGAAAGGAGCTCGGGCAAGAGGATAGACCCTGTCACAGGAGATGTATATCATGTCACCTTCATGTGGCCTGAAAGTGAAGAGGTTGCACAGCGTTTAGAAACACCCAGTACACCGTCGGCAGCTGATCTCATGGCAAGAAAGCTGCAGAAGTTCCACACAGAAGCTCATGCTCTAAAGCGCACATACCACAGCTGCCTGAAGATCATCAATGCAGACCAGCCCCATGTAGACGTCTTTTCACAGGtGCTGAACTATGTGTGTACTCCGCTTCATTCTGCCTCACCCTACACACCCAGAATCCTACTGTTTGGACCCCCAGGTTCAGGAAAGAGTGTTCAGGCAAAACTGATTGCTCAAAAATATGGCATTGTCAACATTTGTTGTGGTGAGCTTCTGAAGGCTGCTTCAGCTGATGAGAGCCATATGGGGGAGCTCATTAAACCCTACCTGGAGTCAGAACAGCAAGTGCCATCAAGTATAGTCCTGCGGATCCTTACAGAGAGACTGAGCAGGATGGACTGTACCACACGGGGCTGGGTGCTCCATGACTTTCCTCAAGATGTGGAGCAGGCAGAAGAACTTCAAGAGTCTAATTACATACCAAACAGGGTCTTCTTCCTGGAGATGACTGATGACATTGCTATAGAGAGGGTAACACTTAGAGGTGTGGATCCGTTACTGGAGAATGGTGAGAAAGAATTAGTAAATTTGTATCACAGCATATATAAACCTGCTCCCAGTCCGGAAGTGCAGTCACGGCTTCGATTTAACCCGCGGCATTCAGAGGCACAGCTGCTAAACAGGCTTAAGGAGTACTGGAGCCATGCAGCGGGCCTGCAGGCCTTCTACCCACAGGCAGTGTACATCAACGCTGACCAGGATCCACACACTGTGTTTGAATCACTGGAGAGCAGACTAGTGGGCCGACTACCTAGAGTTCTGTCTTACTGAGAACCATTTAAGCACTAAACACTTTTATAGGGATACTCCAGAAATATTTTATCTCATCATTTATTCAGTCTCATGCCATCCCAGGTGTAGGACTTTCTttgttctggaaaaaaaaaaatccatctctCTGAGTCCATATAATGCAAGTGAATGGCAACCCCTGTGACTGAATCAGTGTcttttgcaattaaataaaaactgtgtgtAAGACAAA

Function

GO:

id name namespace
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0009142 nucleoside triphosphate biosynthetic process biological_process
GO:0005829 cytosol cellular_component
GO:0005524 ATP binding molecular_function
GO:0004550 nucleoside diphosphate kinase activity molecular_function
GO:0004017 adenylate kinase activity molecular_function
GO:0004127 cytidylate kinase activity molecular_function

KEGG:

id description
K00939 adk, AK; adenylate kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU50668 lncRNA downstream 136332 8474979 ~ 8475180 (-) True G34401
TU50667 lncRNA downstream 138163 8472323 ~ 8473349 (-) True G34400
TU50663 lncRNA downstream 143653 8467620 ~ 8467859 (-) True G34396
TU50662 lncRNA downstream 146126 8464788 ~ 8465386 (-) True G34395
TU50659 lncRNA downstream 147909 8463373 ~ 8463603 (-) True G34392
XR_006250971.1 lncRNA upstream 42903 8674229 ~ 8677583 (-) True LOC122345093
TU50889 lncRNA upstream 43223 8674549 ~ 8676706 (-) False LOC122345093
TU50957 lncRNA upstream 257660 8888986 ~ 8890348 (-) True G34573
TU50958 lncRNA upstream 274081 8905407 ~ 8905624 (-) True G34574
TU50959 lncRNA upstream 285206 8916532 ~ 8916931 (-) True G34575
XM_043240151.1 mRNA downstream 2236 8594064 ~ 8609276 (-) True ddx31
XM_043238437.1 mRNA downstream 36929 8569849 ~ 8574583 (-) False si:ch211-215c18.3
XM_043238435.1 mRNA downstream 36929 8569849 ~ 8574583 (-) True si:ch211-215c18.3
XM_043238436.1 mRNA downstream 36955 8569849 ~ 8574557 (-) False si:ch211-215c18.3
XM_043238434.1 mRNA downstream 36956 8569849 ~ 8574556 (-) False si:ch211-215c18.3
XM_043239029.1 mRNA upstream 1569 8632895 ~ 8643790 (-) False tsc1a
XM_043239030.1 mRNA upstream 1569 8632895 ~ 8643645 (-) False tsc1a
XM_043239027.1 mRNA upstream 1569 8632895 ~ 8643645 (-) True tsc1a
XM_043239771.1 mRNA upstream 239954 8871280 ~ 8876498 (-) True dpp7
XM_043238499.1 mRNA upstream 306928 8938254 ~ 8949378 (-) True stxbp1b
TU50638 other downstream 179937 8429700 ~ 8431575 (-) True timm8b
TU50633 other downstream 196706 8411882 ~ 8414806 (-) True G34372
TU50440 other downstream 890049 7719696 ~ 7721463 (-) False si:dkey-220k22.3
TU50081 other downstream 1214359 7382346 ~ 7397153 (-) True G33998
XR_006251118.1 other downstream 1489048 7122339 ~ 7122464 (-) True LOC122346223
TU50888 other upstream 43223 8674549 ~ 8677718 (-) False LOC122345093
TU50964 other upstream 298144 8929470 ~ 8930053 (-) True G34580
TU51091 other upstream 584182 9215508 ~ 9220507 (-) False vamp5
TU51236 other upstream 706502 9337828 ~ 9402623 (-) True G34789
XR_006251099.1 other upstream 1693789 10325115 ~ 10335342 (-) False si:dkey-96l17.6

Expression Profile